| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3203 |
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| Symbol | atpD |
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| ID | 7134609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2886580 |
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| End bp | 2887989 |
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| Gene Length | 1410 bp |
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| Protein Length | 469 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 643531548 |
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| Product | ATP synthase F1, beta subunit |
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| Protein accession | YP_002427559 |
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| Protein GI | 218665303 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0055] F0F1-type ATP synthase, beta subunit |
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| TIGRFAM ID | [TIGR01039] ATP synthase, F1 beta subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCGAAG CGGTTGCTAA AGAAAACGCC GTCGGCCATA TCGTCCAGGT GATCGGGCCG
GTGATCGACG TCGCCTTTTC TCGCGGGCAG GTCCCCGAGA TTATGGAAGC TATTGTGGTC
GACGCAAACA ATCTGACCAT TGAGGTGCAG GCCCAGTTGG GTGACGGCGT GGCGCGCGGT
ATCGCCATGG GGCCCAGCGA AGGCCTCAAA CGCGGGCTGG CCGTCACTCG TACCGGTGCG
CCGATCAGTG TGCCGGTAGG GCATGCCACC CTGGGCCGGA TCATGAACGT CCTGGGTGAG
CCGGTAGATG GCAAAGGACC CGTGCAGACG GAAGATCGCC AGGCCATCCA TCGCCCGGCG
CCGGCCTTTG ATGAACTTGC GGCAAGCACC GAGGTGCTGG AGACCGGCAT CAAGGTCATC
GATCTGGTCT GTCCTTTCGC CAAAGGCGGT AAGGTCGGTC TCTTCGGCGG CGCCGGCGTG
GGCAAGACGG TGCTCATGAT GGAGTTGATC CGCAACATCG CTATCGAGCA TACCGGATAT
TCGGTGTTTG CAGGCGTCGG CGAGCGGACT CGTGAAGGGA ACGACTTTTA CCATGAAATG
ACCGACTCCG GCGTTTTGGA CAAGGTCGCC CTGGTATACG GGCAGATGAA CGAGCCGCCC
GGCAACCGTT TGCGCGCCGG GTTGACCGGC CTGACCATGG CGGAGCACTT CCGTGATGAA
GGTCGCGACA TTTTGATGTT CATCGATAAC ATTTTCCGCT ATACGCTGGC AGGCACCGAA
GTCTCGGCGC TGCTGGGGCG TATGCCTTCT GCGGTGGGCT ATCAGCCAAC GCTGGCTGAA
GAAATGGGTC AGTTGCAGGA GCGTATCACT TCCACCAAGG TGGGCTCCAT CACCTCGGTG
CAGGCCGTTT ACGTGCCCGC GGACGATCTC ACCGATCCTT CTCCGGCGAC GACCTTTGCC
CACTTGGACG CCACGGTAGT GTTGTCGCGG CAGATTGCGG AACTGGGCAT CTACCCCGCA
CTCGATCCGC TCGATTCTTT CAGCCGTCAG CTCGATCCGC AGATCGTCGG CCAAGAGCAC
TATGATGTGG CTCGTTCCTG CCAGAAGACG TTGCAGCGCT ACAAGGAATT GCAGGATATC
ATTGCCATTC TGGGCATGGA TGAATTGTCT GAGGACGACA AACTGCTGGT GTCGCGGGCA
CGCAAGATTC AGCGCTATCT GTCCCAGCCT TTCTTTGTCG CTGAAGTGTT CACCGGCAGC
CCCGGTACCT ATGTCTCCCT GAAGGAAACG ATCCGTGCAT TCAAGGCGAT CGTGGCAGGA
GAGTATGACC ACCTGCCCGA GCAGGCCTTC TACATGGTCG GCACCATAGA TGAAGCCCTT
GCCAAGGCCC AAAAGCTGCA GCAAGGCTAA
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| Protein sequence | MSEAVAKENA VGHIVQVIGP VIDVAFSRGQ VPEIMEAIVV DANNLTIEVQ AQLGDGVARG
IAMGPSEGLK RGLAVTRTGA PISVPVGHAT LGRIMNVLGE PVDGKGPVQT EDRQAIHRPA
PAFDELAAST EVLETGIKVI DLVCPFAKGG KVGLFGGAGV GKTVLMMELI RNIAIEHTGY
SVFAGVGERT REGNDFYHEM TDSGVLDKVA LVYGQMNEPP GNRLRAGLTG LTMAEHFRDE
GRDILMFIDN IFRYTLAGTE VSALLGRMPS AVGYQPTLAE EMGQLQERIT STKVGSITSV
QAVYVPADDL TDPSPATTFA HLDATVVLSR QIAELGIYPA LDPLDSFSRQ LDPQIVGQEH
YDVARSCQKT LQRYKELQDI IAILGMDELS EDDKLLVSRA RKIQRYLSQP FFVAEVFTGS
PGTYVSLKET IRAFKAIVAG EYDHLPEQAF YMVGTIDEAL AKAQKLQQG
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