Gene AFE_3137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_3137 
Symbol 
ID7136484 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2823014 
End bp2823529 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content53% 
IMG OID643531488 
ProductDNA-binding response regulator 
Protein accessionYP_002427499 
Protein GI218665053 
COG category[K] Transcription
[T] Signal transduction mechanisms 
COG ID[COG4567] Response regulator consisting of a CheY-like receiver domain and a Fis-type HTH domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0521248 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGGTGG ACGACGATGT AACCTTTTGC CGGGTGCTGT CAAACGCGTT TTCCAGGCGC 
GGTTTTGAAG TATGCACTGT GCATGATAGC GCCGATATAA TCGCGGTTGC GGAACTTTAC
GTGCCGGACG CCGTAGTTCT GGATCTGCGA ATGCCGGGGG TTTCCGGTTT GGAAATGATA
AGCCCCCTTC GGAGCATCAA CCAGGATATC AGAATCCTTG TGCTCACCGG TTACGCCAGC
ATCGCAACAG CGATTGAGGC CATAAAGCTC GGGGCGGTAT ATTATCTGAC AAAACCTGCA
GATGCAGATG AGATTATCGC TAGGTTACAT GAAAAGGATG GCAACCCCAC CGCTCCGGTC
AAAAACGAGT TCTTGTCAGC GCGCAGAGTT GAATGGGAGC ATATCAACAA GGTACTGATG
GAGTGTAATG GCAACATATC GGCTGCCGCC CGCAGACTGG GAATGCACCG ACGGTCCTTA
CAACGCAAGA TGAATAAGCA CCCCGTACGA CGCTGA
 
Protein sequence
MVVDDDVTFC RVLSNAFSRR GFEVCTVHDS ADIIAVAELY VPDAVVLDLR MPGVSGLEMI 
SPLRSINQDI RILVLTGYAS IATAIEAIKL GAVYYLTKPA DADEIIARLH EKDGNPTAPV
KNEFLSARRV EWEHINKVLM ECNGNISAAA RRLGMHRRSL QRKMNKHPVR R