| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3050 |
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| Symbol | tatC |
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| ID | 7135417 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 2738323 |
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| End bp | 2739129 |
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| Gene Length | 807 bp |
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| Protein Length | 268 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 643531401 |
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| Product | Sec-independent protein translocase TatC |
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| Protein accession | YP_002427417 |
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| Protein GI | 218667741 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0805] Sec-independent protein secretion pathway component TatC |
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| TIGRFAM ID | [TIGR00945] Twin arginine targeting (Tat) protein translocase TatC |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.927956 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGGACAAAT TGGCGGAAAA CACCTTTATC GGCCATTTGC TGGAGTTGCG CCGCCGCGTG
TTATTTGCAG TGATCGCTAT TTTTGTTGGC TTTCTGATCT CCTATCCTTT CTCCAAAACG
ATTTATAACA TTCTCGCGGC CCCGCTTATT GATATATTAC CAAAGGGCAG TCATTTAATT
TATACCAGTT TACCCGAAGT ATTTTTGACC TACGTGCAGC TTTCTTTGTT GTCCGGATTT
ATTCTGGCGC TACCTGTCGT GCTCTATCAA TTCTGGGCCT TCATAGCGCC CGGCCTCTAT
GAGCATGAGC GCAAGGCCTT TTTTCCGCTG ATCTTTGCCT CCATTTTTCT GTTCATCGGC
GGCATGCTCT TTGCGTACTT TATCGTATTT CCCAATGCCT TCCGGTTTTT CGTGAGCTTT
TCTGGCGGTG ATATCACCGC CATGCCCAAA GTGGATAGTT ACCTCTCGCT CATCGTCAAG
TTCTCCCTGG CCTTCGGTCT GGCCTTCCAG ATCCCCATTC TCATTATTGT ACTGGTACGC
GTCGGGGTGC TGCAGGTGGC CACACTGCAG CACGGTCGCC GCTATGCCTT CCTGATTTGC
GCCATCGCCT CTGCATTGCT CAGTCCTCCC GACGTGTTAT CCATGGTCAT GCTCCTCATC
CCCATGTATA TGCTTTTTGA ACTCGGATTA TTTTTCGCCG CAAGATTGCC CGGGCCTCGG
CCTGCGGAAG AAGACACCGG GGATAATGAT ATTGCTCCGT CATCCCACAG CATTGACGAG
AAGGATAGTG ATACATCACG AAGCTGA
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| Protein sequence | MDKLAENTFI GHLLELRRRV LFAVIAIFVG FLISYPFSKT IYNILAAPLI DILPKGSHLI
YTSLPEVFLT YVQLSLLSGF ILALPVVLYQ FWAFIAPGLY EHERKAFFPL IFASIFLFIG
GMLFAYFIVF PNAFRFFVSF SGGDITAMPK VDSYLSLIVK FSLAFGLAFQ IPILIIVLVR
VGVLQVATLQ HGRRYAFLIC AIASALLSPP DVLSMVMLLI PMYMLFELGL FFAARLPGPR
PAEEDTGDND IAPSSHSIDE KDSDTSRS
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