| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3032 |
|---|
| Symbol | |
|---|
| ID | 7137255 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 2722793 |
|---|
| End bp | 2723482 |
|---|
| Gene Length | 690 bp |
|---|
| Protein Length | 229 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 643531383 |
|---|
| Product | nucleotidyltransferase family protein |
|---|
| Protein accession | YP_002427399 |
|---|
| Protein GI | 218666437 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis
[M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1208] Nucleoside-diphosphate-sugar pyrophosphorylase involved in lipopolysaccharide biosynthesis/translation initiation factor 2B, gamma/epsilon subunits (eIF-2Bgamma/eIF-2Bepsilon) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCCC CCATCACCCG TGCGATGATA CTGGCCGCAG GTCGGGGTGA GCGGCTCCGG
CCTCTCACCG ATCATGTCCC CAAGCCCCTG CTGGAAGTTG CGGGTAAGCC GCTCATCGTG
CGTCACCTGG AGTCATTGCT TGAGGCCGGC ATTCAGGATG TTATCATTAA CGTCGGTTAT
CTGGGCGACG CCATCATGCA AGCTCTGGGT ACGGACTGGC GGGGACTGCG GATCCATTAC
AGCGACGAGC GCGGGGGCCG TCTGGAGACG GGGGGTGCCA TTGTCCGTGC CTTGCCTTTA
TTGGGGGACG CGCCTTTTTT GCTGGTGAAC GGTGATATTT GCACGGACTT TCCCTGGACC
CGTCTCTGTC AGCCTTCTTC CGCGCGTGCG CATCTGGTGC TGGTGCCCAA CCCGGTCCAG
CACCCGCAGG GAGATTTTGC GTTGTCCGCC AGCGTGGTGG CTTTGGCGGG CGAAGAGCGT
CATACTTACG CGGGTATCGC CCGTCTCGAC CCAGAGCTGT TTCGGGAGTT TCCCGAGCAG
CCGGCCCCTC TGGCGCCTTG GCTGCGGCGG TGGATTGCGG CGGGTCTGGT GGAGGGAAGT
TTGTATCAGG GAAAGTGGAC GGATGTCGGC ACACCGGAGC GGTTGCGGAT AGCTGAGCGT
GATTGCGCAG AGGTCCCCGG TGGACTTTGA
|
|---|
| Protein sequence | MAAPITRAMI LAAGRGERLR PLTDHVPKPL LEVAGKPLIV RHLESLLEAG IQDVIINVGY
LGDAIMQALG TDWRGLRIHY SDERGGRLET GGAIVRALPL LGDAPFLLVN GDICTDFPWT
RLCQPSSARA HLVLVPNPVQ HPQGDFALSA SVVALAGEER HTYAGIARLD PELFREFPEQ
PAPLAPWLRR WIAAGLVEGS LYQGKWTDVG TPERLRIAER DCAEVPGGL
|
|---|
| |