| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_3019 |
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| Symbol | ptsH |
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| ID | 7136547 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2713658 |
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| End bp | 2713930 |
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| Gene Length | 273 bp |
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| Protein Length | 90 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 643531370 |
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| Product | phosphocarrier protein HPr |
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| Protein accession | YP_002427386 |
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| Protein GI | 218665778 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1925] Phosphotransferase system, HPr-related proteins |
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| TIGRFAM ID | [TIGR01003] Phosphotransferase System HPr (HPr) Family |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.330484 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGACACTGC GTGTAGACTA TCCTATTATC AATCGGCTCG GTCTGCATGC GCGACCGTCG
GCTAAATTCG TCAGCCTCTC GGCACGTTGT CCCTGTGCGG TCTGGCTGGA GCGGGATGGC
CAGAGAGTCA ATGGTAAGAG CATCATGGGG CTGATGACCC TTGCCGCGGC ACAGGGGACC
ATTCTGACCT TGGAAACCGA TGGTGAGGGA GAACAGGCCT GTGCCGATGC CCTGCTTGCC
CTCGCGGCGG ATCGTTTTGG TGAAGAATCA TGA
|
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| Protein sequence | MTLRVDYPII NRLGLHARPS AKFVSLSARC PCAVWLERDG QRVNGKSIMG LMTLAAAQGT
ILTLETDGEG EQACADALLA LAADRFGEES
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