| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2992 |
|---|
| Symbol | |
|---|
| ID | 7134897 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 2680603 |
|---|
| End bp | 2682099 |
|---|
| Gene Length | 1497 bp |
|---|
| Protein Length | 498 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 643531343 |
|---|
| Product | peptide ABC transporter, periplasmic peptide-binding protein |
|---|
| Protein accession | YP_002427359 |
|---|
| Protein GI | 218667937 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0747] ABC-type dipeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 0 |
|---|
| Plasmid unclonability p-value | 0.022499 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAATGGTT TCAACCCTTT GCTGACCTCA TCAGCGTATG ATTCAGAGGC GGAAAGTTTG
ATGTATCAAC CTCTGCTCTG GGTCAACCGT GATTTCAAGA TCAACTTTAA GTTGAGCATT
GCCAAAAAAA TCGTTGTAGG TCAAAAGGAT CGTAGCTATA CGGTTTATTT ATCCCGCCAC
TGGAAGTGGT CTGATGGAAT TCCTGTGACT ACGGCAGACG TGGCTTATAC GTATCACATG
CTGATGAAGT TGGGGCCCTT GTGGCCCGGT TGGGATAGTG GCGGGTTTCC TGGCGATATC
CAGTCATTCA AGGTGCTGGG ACCGTATGCA TTTCATGTGG TTACAACGCG ATCAGTAAAT
CCCACCTGGT TTGAACTGTC TGGATTGAGT GATTTTTATC CCTATCCTGC TCATAGCTGG
CAGCATTACA CCGTCAAACA GATGAATGAT AATATGACCA ATCCACAGTT TTATTCGGTG
GTAGACGGGC CTTTCCGACT GGAAAGCTTT CATGCCGGAC GCTATGCCAG TATGGTCCCG
AATCCCGCGT ACAGCGGTCC TGACAAGCCG CATATCAGCC GCTTGATATT CCGTTTTCTC
AATTCTAATG CCAGTGTGTT TTTCGCCTTG AAGAGCGGTA CGATTCAGTT GGGTAATTTG
CCGCCTCCCC TGTATCCGGC ACGTAAACAA CTGACGGATG ACCGATTGAC AATCAGTGGA
CCCAATTGGG GGTTCAATTA CCTGGGGTTT AATTTTTCCA ATCCAAAAAT TGCATTTGTG
AAGAGCGTGT TGGTGCGCCA GGCCATGATG CATGCCATCA ATCAGAATTT GATGATCAAG
GTGATGGGTT TTGGTCATGG TGCCCGTGCT TATGGGCTGG TGCCGGGAAA TCCTCCAGTA
TATTTGTCGC CGGAGGCCAA GACCTTACTC AAACAAGGCG CTTATGATCC GGCGCTGGCA
GATAAATTGC TGAACGAAGC GGGTTGGCAT CGCGGATCCG ACGGTATTCG TGTAAAAGAT
GGTCATAAGA TGATGTTTAC TTTGTATATT CCGCCATCCA TGATCAGGGG GCCAACCTTG
TTGGCAACCA TGTTTGCCAA AGTCGGTATT TTGGTGCGTA TGCGGGAAAT GCCATTTAAT
GAGCTTTACG AAAAAATGAT CGATCCACAT AGCAAAAACT GGCAGGCGGT TTATCTCGCC
TGGTCGCAAA CTGCATATCC TACGGGTGGT TCCATTTTCA AGTGTGGTGG CGTTCAGAAC
AGTTACCATT ACTGCAACAA AAAAATGGAT GTAATGATGG ATAAAATAAG AATCACACCG
GGGCTTGATG CCTTGTATAA ATTCCAAAAC TATTTTACAA AGCAGCAGCC AGTTATTGTT
CTTCCTAACA TGCAATTGTT TGTGATGGCT GCTAAAAACA TTCATGGTGT TAGCCATGCC
ATCACTCCGG GAGGTGGTTT TTATCCACAG TTTTTATGGG TTAGCCATGA TAAATAA
|
|---|
| Protein sequence | MNGFNPLLTS SAYDSEAESL MYQPLLWVNR DFKINFKLSI AKKIVVGQKD RSYTVYLSRH
WKWSDGIPVT TADVAYTYHM LMKLGPLWPG WDSGGFPGDI QSFKVLGPYA FHVVTTRSVN
PTWFELSGLS DFYPYPAHSW QHYTVKQMND NMTNPQFYSV VDGPFRLESF HAGRYASMVP
NPAYSGPDKP HISRLIFRFL NSNASVFFAL KSGTIQLGNL PPPLYPARKQ LTDDRLTISG
PNWGFNYLGF NFSNPKIAFV KSVLVRQAMM HAINQNLMIK VMGFGHGARA YGLVPGNPPV
YLSPEAKTLL KQGAYDPALA DKLLNEAGWH RGSDGIRVKD GHKMMFTLYI PPSMIRGPTL
LATMFAKVGI LVRMREMPFN ELYEKMIDPH SKNWQAVYLA WSQTAYPTGG SIFKCGGVQN
SYHYCNKKMD VMMDKIRITP GLDALYKFQN YFTKQQPVIV LPNMQLFVMA AKNIHGVSHA
ITPGGGFYPQ FLWVSHDK
|
|---|
| |