Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2896 |
Symbol | |
ID | 7135955 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2572636 |
End bp | 2574696 |
Gene Length | 2061 bp |
Protein Length | 686 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643531248 |
Product | O-antigen polymerase family protein |
Protein accession | YP_002427265 |
Protein GI | 218666154 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG3307] Lipid A core - O-antigen ligase and related enzymes |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAATCCTG CCGTACCCTC ATATCGGGTC GGGCTCTATG CGGCCTTTCC CCTGATCGCC TATTTTCTTT CCTGGTATTA CAACGGTCAG ATGATCCCGC TGCTGGCAGT CACCAGCATG GTTTTGATGG TCTGGGGTGC CCTGGTCTGG TGGCCGCGCC TGGGGGAGGG ACTGGCCTGG CCGCGGGGGT TTTTGCCGAT CTTCATGCTG CTCTGGCTGC TGTGGTTTGG CCTGACCCTG TTCTGGAGCG GATCGCCTTA CACGAGCTGG TTCTACTTTT GGGTATTGGG TGCTCTGCCG CTGACATTTC TCATCAGCGT GATGATCCCG GCGCCGGTCG CAGAACGGGC CTGGCCCTGG TTTTGGCGAG GGATCCTGCT GAGCGCCTGG ATTCTGAGCG GCATGGCGCT CTGGCAGTAT TACCACTGGA TGGGGCAGGG CGTTGGCCTA TCCGGCTTGC GGCCTTATGG TCCGCTACTG GATACCAACA GTTTCGCAGC GTGGCTGAAT CTCCTGTTTT TCCCCATTCT TGCCGTTTAC CTCATCGATG ATGAGAAACG CGGTACGCGC TTTGGGTCGC TTCAGCTAAA CATGGTCGGG TTATTTTATC TCGCCACGCT TACCGTAATC CTTCTCGCGT TTTTTTCTAC GAACAGTCGG GGTGGGTTGC TGGCGTGGGT CAGTACGATG CCTTTTGTTT TCTGGGCGTT CGGAAGGCGC CCGGGCGGCT GGGCGCGTAT GGCTGTGATA ACCGCTGTGG CGTTGATCAG CTTTTCCCTG CTGGGTTATC CCCAGGGCTA TGACCTTCTG GGACATCTGG CGCCAGGCTT CATTACCCAT AACCTTTCTA CGGTTGCCCG CGGGTTGATG TGGGTGGCGA CCTGGCATAT GTTTCTCAGC CATCCTTGGC TGGGTACCGG CCTCGGGTCT TATTTTCTGA ATTATCCTGC CTACCGTCTG CCCGGCGAAC TGGCGTCGGC GGGTACGTAC GCCCACAATG ATTACCTGGA ATATCTGGCC GAGGGAGGGC TCATCAATCT GGGCTTTCTC CTCGGCTTTG CCGCGACCCT GATGTACGCC CTGTACCGTC TGCTTTACCG TGCGGGTAAG GTCTTGCAGG TGCCGGATGA ACGCCGCTTG CAGGCCCTGG GTCTGGTGCT CGGGGTTTTT GCCGTTACCG GCCATGCCCT GGGGAATTTC ATTTTCTACA ATCTACCCCT GAGTCTGCTG GCTGGCCTCT TTCTGGCACG TGCCTGGCGG TTCTACGGTA TCCAGGCCGA GACTATGCCC TTGCTACCAC GGATCGGCAT TAACCATGGA TTCATCGTGC AAGCGCTCCT GGTGCTGGCG GTGGTGGCGG CTTCCTGGAA TCTGACCGCC GATGGCGCGA CTTTCGCCCT GCTGAGCGAA AACGGCTGGC TCAACCGGTT GATCAGCAAC GCGAACCAGC GTGCCGTGTT TCTACTCAAA GCGGCGGATG CGCTGACGCT GGTACGACCG TTGGCGACCC AACCCCATGT GTATCTGGCC AATACCTATC TCAGCCTCGC AGATCGCGGA AACCAGACGG ATATTGCCCA ACGCCGTTCC CTGGTAAAAG CGGCGCTCCG TCAATATCGC CAGAGTCTGG TGGGAATTCC GCAGCAGTCG GGCGTGTGGA ATTCCATCGG CACGCTCTAT CTGGAGCAGG GTGCCCTGCT CGGCCTGGAC AAGGCGCAGC AGGACCGGTT GGCGTTGCTG GCCTGGCGTA AAGGCCTGGC GATCAATCCC GAAAGTGTCG GCCTGCGCAA CAAAATCGCC CAACTGGCCT ATGTGGATCA GGGGCACGTC GGGGAGGGTA TAGCCTTTTT GTCTGCCGGG TTACGGCGGC CGCTCTTTCC TTACCCGCGC AGTAATCTGC AGATGGAAAT CGCCCTCACC CAATGGCGGG CAGGTGAAAA ACATGCGACG GAAGCCACCC TGTTGCAATT GTTGCGCGCG AATCCGGGCT ATACTCCGGC TGTTTCCTGG CTGCAATCCA TTCATCGCCA GACTGCGAAG GAGGCGGCAA TATCGCACTG A
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Protein sequence | MNPAVPSYRV GLYAAFPLIA YFLSWYYNGQ MIPLLAVTSM VLMVWGALVW WPRLGEGLAW PRGFLPIFML LWLLWFGLTL FWSGSPYTSW FYFWVLGALP LTFLISVMIP APVAERAWPW FWRGILLSAW ILSGMALWQY YHWMGQGVGL SGLRPYGPLL DTNSFAAWLN LLFFPILAVY LIDDEKRGTR FGSLQLNMVG LFYLATLTVI LLAFFSTNSR GGLLAWVSTM PFVFWAFGRR PGGWARMAVI TAVALISFSL LGYPQGYDLL GHLAPGFITH NLSTVARGLM WVATWHMFLS HPWLGTGLGS YFLNYPAYRL PGELASAGTY AHNDYLEYLA EGGLINLGFL LGFAATLMYA LYRLLYRAGK VLQVPDERRL QALGLVLGVF AVTGHALGNF IFYNLPLSLL AGLFLARAWR FYGIQAETMP LLPRIGINHG FIVQALLVLA VVAASWNLTA DGATFALLSE NGWLNRLISN ANQRAVFLLK AADALTLVRP LATQPHVYLA NTYLSLADRG NQTDIAQRRS LVKAALRQYR QSLVGIPQQS GVWNSIGTLY LEQGALLGLD KAQQDRLALL AWRKGLAINP ESVGLRNKIA QLAYVDQGHV GEGIAFLSAG LRRPLFPYPR SNLQMEIALT QWRAGEKHAT EATLLQLLRA NPGYTPAVSW LQSIHRQTAK EAAISH
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