| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2853 |
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| Symbol | trmD |
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| ID | 7134967 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2538757 |
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| End bp | 2539500 |
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| Gene Length | 744 bp |
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| Protein Length | 247 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643531206 |
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| Product | tRNA (guanine-N1)-methyltransferase |
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| Protein accession | YP_002427223 |
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| Protein GI | 218666832 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0336] tRNA-(guanine-N1)-methyltransferase |
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| TIGRFAM ID | [TIGR00088] tRNA (guanine-N1)-methyltransferase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.456825 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCGTTTTG ACGTCCTCAC CATCTTCCCT GGGCTGATCC ACGGCTACTT GCAGGAAGGC
ATTGTCGGAC GCGCGCTGAG CCGCGGGCTG ATCGAGGTGC ATACCTGGAA CCCTCGGGAT
TTCAGTGACA GCGCTTACCG GCGGGTGGAT GACCGCCCCT TCGGCGGTGG GCCGGGTATG
CTGATGATGG CTCCACCCTT GCTGGCGGCG ATTGCGGCGG CGCGACAGGC CAACTCCGGG
GCGCCGGTGA TTTACTTGTC ACCCCAGGGG CAGCGCCTGC AGCAGCGGGC GGTGCAGGAT
TTTGCAGCGG CACCGGGTCT GATTTTGCTG GCAGGTCGTT ATGAAGGTAT TGATGAGCGG
GTGCTGGCGG CAGTGGATGC GGAATGGTCC ATCGGCGACT ACGTGCTGGC GGGCGGGGAA
TTGCCGGCGC TGGTGCTGAT GGAGGCTGTG GCGCGGCAGT TGCCGGGTCT GCTGGGTCAT
GCGGATTCCG CAGCAGAAGA CAGTTTCGCG GCGTCTGGCC TGCTGGATTG CCCGCATTAT
ACCCGGCCCG AGGTGGTGGC GGGGGAAGGA GTCCCGGAGG TGCTGCTTTC CGGAGATCAC
GCACGTATCC GGCGCTGGCG TCTGCAGCAG TCGTTGGGCC GCACCGCTGA GCGGCGCCCG
GATTTGCTGG AGCAGCGAGG GCTGCGGGCA GATGAGCAAA TATTGTTGGA AGAGTATCGC
CGTCAGCGCG GCGAAGCGCA GTAA
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| Protein sequence | MRFDVLTIFP GLIHGYLQEG IVGRALSRGL IEVHTWNPRD FSDSAYRRVD DRPFGGGPGM
LMMAPPLLAA IAAARQANSG APVIYLSPQG QRLQQRAVQD FAAAPGLILL AGRYEGIDER
VLAAVDAEWS IGDYVLAGGE LPALVLMEAV ARQLPGLLGH ADSAAEDSFA ASGLLDCPHY
TRPEVVAGEG VPEVLLSGDH ARIRRWRLQQ SLGRTAERRP DLLEQRGLRA DEQILLEEYR
RQRGEAQ
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