| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2704 |
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| Symbol | |
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| ID | 7134499 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 2409224 |
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| End bp | 2410660 |
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| Gene Length | 1437 bp |
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| Protein Length | 478 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 643531060 |
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| Product | type II/III secretion system protein |
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| Protein accession | YP_002427081 |
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| Protein GI | 218666419 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4964] Flp pilus assembly protein, secretin CpaC |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCGCAAAT GGATGATGAG CAGTTTGGCG GTGGCGACCC TGGCGGCGCT GGGCTCCCAG
GGCGCCTGGG CGGAAGGGCC GGCGGCGGAG GGCGGCGCCC ATCCCTCCTG GGCCGCGCAC
CAGAGCGGCG GGTACCGCGC GCTGAATATC CCGGTGGGCA CCCAGCAGAC CCTGAGTTTC
ACCGAGCCGG CCTACCGGGT GGCCGTCGGC AACCCGAAAA CGGCATCGGT GGCGCCGCTG
CCGCGTTCCG GCGGCCGGCA GTTTCTGATC ACCGGCCTCA GTACCGGCAC CACCAGCCTG
CTGGTCTGGA ACCTCGGCCA CAAGACGCCG AAGGTCTGGC AGCTTCAGGT CAGCGTGCCG
GTGCCCGGAG CGCCTCTGGC GGCGCCGGCG CCGGGCATGC CCGAAGTGCG CGCCCAGGGC
GATGCCGTCA CCCTGTCCGG CGCGGTGGCG GACCAGGTGA AACACGAAGC GGCCCTGGAA
GCGGCGGCGC TGGCCGCCGG CAAAACCGGC AAGGTCATCG ACCAGTCGGT GATTCCGGTG
GATGACGAGG TGCAGGTCGG CGTCAAGGTG GTGGAGTTCA GCAAGGCGCA GTTGAAGAAT
GTCGGTATCA ACATTTTCTC CAGCACCGGC GGTTTCAGCC TGGGCACCTT CGGTCCCTCC
ACCCTGACCT CGGCCAATTA TCCGGTATCC CTGGCGAGCG GCGGCCCGGG GGCGCTGGCG
ATCACCGGCG TGGCGCCCTT CACCCAGGCC TTCAATCTGG TGGGCGGGGT CGGCAACAGC
GGCCTGAGCA GCTACCTCAG CTTGCTGGAG GGCAACAATA TCCTCCGGGT GCTGGCGGAA
CCGACGCTGG TGGCGATGAA CGGCCAGCAG GCGAGCTTCC TCGCCGGTGG CGAAATCCCG
ATTCCCGTAC CGCAAAGCAG CGGGGTCGGC ACCCCCACCA TCACCATCCA GTACAAAAAA
TATGGCGTGC AGCTCGATCT GACCCCCACC ATCCTCAGCG CCCACCGGAT CGCCCTGCAT
GTGGCGCCGT CGGTCAGCTC TCTCGACTAT ACCAACGCCA TCACCCTCAA CGGCTATTCG
GTGCCCGCCC TGCTGGTCCG TCAGGCCGAC ACTACCGTCA CCCTCGGCAA TGGCGAGAGT
CTGGTCATCG GCGGTCTGGT GGATCGCCAG ATGCAGCAAA ACATCAGCAA AGTGCCGATC
CTGGGGGATC TCCCCATACT GGGCGCCTTC TTCCGTTCCA TTCAGTATTC CAAGCAGGAC
ATGGAACTCG CCATCATCGT CACCCCGCGT CTGGTGCGCC CCATCGCCGC CGGAGCCAAG
CTCCCGCCCT TGCCGGGAGC GGCCTTTGCC CATTCCCGCT TCAATCTGGG CAAGGCGGTA
TTGTTGCCCG GGTCGGACTA TAACCAGCCC GACAACGGTC CCGGATACAG TCAATGA
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| Protein sequence | MRKWMMSSLA VATLAALGSQ GAWAEGPAAE GGAHPSWAAH QSGGYRALNI PVGTQQTLSF
TEPAYRVAVG NPKTASVAPL PRSGGRQFLI TGLSTGTTSL LVWNLGHKTP KVWQLQVSVP
VPGAPLAAPA PGMPEVRAQG DAVTLSGAVA DQVKHEAALE AAALAAGKTG KVIDQSVIPV
DDEVQVGVKV VEFSKAQLKN VGINIFSSTG GFSLGTFGPS TLTSANYPVS LASGGPGALA
ITGVAPFTQA FNLVGGVGNS GLSSYLSLLE GNNILRVLAE PTLVAMNGQQ ASFLAGGEIP
IPVPQSSGVG TPTITIQYKK YGVQLDLTPT ILSAHRIALH VAPSVSSLDY TNAITLNGYS
VPALLVRQAD TTVTLGNGES LVIGGLVDRQ MQQNISKVPI LGDLPILGAF FRSIQYSKQD
MELAIIVTPR LVRPIAAGAK LPPLPGAAFA HSRFNLGKAV LLPGSDYNQP DNGPGYSQ
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