Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2597 |
Symbol | |
ID | 7135555 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 2306274 |
End bp | 2307593 |
Gene Length | 1320 bp |
Protein Length | 439 aa |
Translation table | 11 |
GC content | 59% |
IMG OID | 643530953 |
Product | sigma-54 dependent transcriptional regulator, putative |
Protein accession | YP_002426977 |
Protein GI | 218667045 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG3829] Transcriptional regulator containing PAS, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCCATTG GGCTGGATGT CGGCAGTGTC CTCAATATTC AGCAGAATCC CATGGTGCTG ATCAATCGGG ACTATCGGAT TATAGCCGCC AACCGCGCCT ATCAGGATGC CTATGGCGTG CGTGCGGATG AGGTGGTCGG GAAGTGTTGC CATGAAATCT CCCATCACTC CCCGGTACCT TGTCACATGT GTGGAGAAGA TTGTCCTCAT CAGGCGGTGT TCAACACCGG AGAAGCGCAT GAGGTGCGTC ACATTCATTA TGACCACCAG AATCATGCCG AGCATGTGCG GATTCGCGGC CATGCCATCA AGGATCAGGA CGGTAATGCG TATCTGGGGG AGGAAATCAT CCGTCTCCCG CGCCAGGAGG AGGAAATCAC CTGCGGTGAG TTGCGTATGG TAGGACGCTC ACCCGCCTTT ATGCGCTGTC TGCATCATCT AGAAATGGCA GGGCGGACGG ATGCCAGTAT CCTGCTGTCC GGTGAGAGCG GGGTGGGTAA GGAGCTGGCC GCCAACGCTC TGCATCAGTT CTCGGTGCGG GCGAGTGGTC CTTTCATCAC CGTCGATTGT GCTTCCTTGC CGGAGACCCT TTTTGAAAGC GAGATACTGG GCCACGAGCG GGGAGCCTTC ACCGGTTGTC TCGGGCGCAA ATGCGGGCTG TATGAAATGG CCCATGGCGG CACTCTGTTT CTGGATGAGG TCGGTGAACT ACCGCTTGCC ATGCAGGCCA AGCTGCTGCG GGTACTGGAA ACGGGTAGCT TTCGGCGTCT GGGCGGAGCG GAAACTCTGC ATGCAGACGT GCGCGTAGTG GCCGCCACCA ATCGCAACCT GCTGGAGATG GCGACGCAGC GGGCCTTTCG TGAAGATCTC TATTATCGTT TGGCGGCCAT TACCATTGAT TTGCCGCCGT TGCGTGAGCG TCGCGAAGAT ATCGCGGGTA TCGCCAAAGT TTTGCTGGAT CGCATTGGCA GGAACTGGGG CGGGGGTTGG AGCTTGTCCA AGGAGGCGGA GATTCGTCTG TGTGCCTACG ATTTTCCGGG CAACGTGCGG GAGTTGCGCA ATATTCTGCA AAAGGCGGCG GCGCTGGCGG ATGGCCCGGT CATTCAGCCT CGGCATCTGG ATTGGGCGGT ATCGCGCAAA GCAGCCCTGC CGACAGCAGA GCGACCGTCG CTCCCTGGGC CGGGGAAGAC TGGACTGCAC CCTGACAACC TCGACGAATT GTTGCGTCGC TATCATGGTA ACAGGCGCCA GGTGGCAGAT GTGCTGGGTG TTTGTGAGCG AACGGTGTAC CGCTGGTTGC AGCGCCAGAC CGCTGGATAA
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Protein sequence | MSIGLDVGSV LNIQQNPMVL INRDYRIIAA NRAYQDAYGV RADEVVGKCC HEISHHSPVP CHMCGEDCPH QAVFNTGEAH EVRHIHYDHQ NHAEHVRIRG HAIKDQDGNA YLGEEIIRLP RQEEEITCGE LRMVGRSPAF MRCLHHLEMA GRTDASILLS GESGVGKELA ANALHQFSVR ASGPFITVDC ASLPETLFES EILGHERGAF TGCLGRKCGL YEMAHGGTLF LDEVGELPLA MQAKLLRVLE TGSFRRLGGA ETLHADVRVV AATNRNLLEM ATQRAFREDL YYRLAAITID LPPLRERRED IAGIAKVLLD RIGRNWGGGW SLSKEAEIRL CAYDFPGNVR ELRNILQKAA ALADGPVIQP RHLDWAVSRK AALPTAERPS LPGPGKTGLH PDNLDELLRR YHGNRRQVAD VLGVCERTVY RWLQRQTAG
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