| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2546 |
|---|
| Symbol | |
|---|
| ID | 7134358 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 2264956 |
|---|
| End bp | 2266089 |
|---|
| Gene Length | 1134 bp |
|---|
| Protein Length | 377 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 643530902 |
|---|
| Product | radical SAM domain protein |
|---|
| Protein accession | YP_002426926 |
|---|
| Protein GI | 218667910 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1856] Uncharacterized homolog of biotin synthetase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGAAATTC ATATGAACCC ATGGTTGAAC GCTGTTGCGC AAGTAGAGGC TTTGGAGGAT
CTGGTCCTCA ATGCGGATCT GGTGGACTCT ATGCGCGAAC GGTGGTCCGG TCTGTCCGGT
AGTCAGGTGG GTCGTATCAA TTTCTATACG CCTTCTTTCA AGCACCATGA AACGTCCGAA
GTTTCCGCCT GCGGGAAGAA TGCTTTTCCG GCCATATCCA TCACCGGTGG TGATTGCAAG
TTGCAGTGTG ACCACTGTAA GGCGAAGATT CTGGAGCCGA TGATTCCGGT GCGCACGCCG
GAAGAACTGG ATCGTCTGGT GGACCGGATC GTCCTGGATG GGGGCCGTGG GCTGCTGCTT
TCAGGAGGTT CGGACCATCA GAACGTGGTC CACTATGAAC CCTATTTCCC GACGGTGCGC
AAGATCAAGG ATCGCTATCC GAATTTACAG ATCGCCATGC ATACGGGTAT CGCCACCCCG
GAGTTCGCGC GTGGGATGGA GGATGCGGGT GTCGATGTGG CCATGATGGA TGTGATCGGT
GCCCAGGACA CCATCAACCA GGTCTACCAT TTGCGCCGTT CGGTGGATGA TTTTGAGGCG
GCGCTGGAGG CATTGGTGGC CACCAGGATG AAAGTGGTGC CGCATATCGT CATCGGGCTG
CATTACGGTG AATTGCTCGG TGAGTGGAAC GCTCTTGAAA TTATCCAGCG GCATCTGCCC
AGTGCCCTGG TGCTGGTGGT GATCATGCCG CAGTATGCCG CTTCGAGCCG GCCTTTCGCG
ACGCCAGCGG CGGATGAAAT TGGTAAATTC TTTATGGATG CGCGGGCTGC GCTGCCGGAA
ACACCGGTAT TGCTGGGCTG CGCACGGCCT TCCGGGGTGC ATCGTTCCAT CACCGATACC
TATGCGGTCA TGGCGGGACT GAACGGGGTG GCCTTCCCCT CTGATGGCAT GCTGGCCCTC
GCCAAGCACC TGGAACGGGA TGTCTTTGTG ACACCGTCCT GCTGCTCCAT GATTGTCGGT
GAAGAAGTCC TGGCGCTCGG TGACGAGACG ACCACTGTGC CTCTGGATTA TGTCCCCGCC
GCGCCGAAAC GTCGCCCACA ACTGCGGGAT ATCCCGATTG TGTTTACGGC CTGA
|
|---|
| Protein sequence | MEIHMNPWLN AVAQVEALED LVLNADLVDS MRERWSGLSG SQVGRINFYT PSFKHHETSE
VSACGKNAFP AISITGGDCK LQCDHCKAKI LEPMIPVRTP EELDRLVDRI VLDGGRGLLL
SGGSDHQNVV HYEPYFPTVR KIKDRYPNLQ IAMHTGIATP EFARGMEDAG VDVAMMDVIG
AQDTINQVYH LRRSVDDFEA ALEALVATRM KVVPHIVIGL HYGELLGEWN ALEIIQRHLP
SALVLVVIMP QYAASSRPFA TPAADEIGKF FMDARAALPE TPVLLGCARP SGVHRSITDT
YAVMAGLNGV AFPSDGMLAL AKHLERDVFV TPSCCSMIVG EEVLALGDET TTVPLDYVPA
APKRRPQLRD IPIVFTA
|
|---|
| |