Gene AFE_2378 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2378 
Symbol 
ID7136185 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp2124795 
End bp2125946 
Gene Length1152 bp 
Protein Length383 aa 
Translation table11 
GC content53% 
IMG OID643530743 
Producttype I restriction-modification system, S subunit 
Protein accessionYP_002426767 
Protein GI218667989 
COG category[V] Defense mechanisms 
COG ID[COG0732] Restriction endonuclease S subunits 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGGCAACTC GCACCAAACA GAAAAACCGC GATGAAAAAA TTACTCGCGT GCTGACGAAC 
TCAGCCGAGT TTGGCGTGAT GGACCAGCGC GACTTCTTCG ACAAAGAAAT TGCCACGCAA
GGCAATCTCG AGAGCTATTT CGTAGTTGAG CTGGGCAGCT ATGTTTACAA CCCGCGCATC
TCTGCAACAG CACCTGTTGG CCCCATTTCT AAGAACAAAG TTGGCACTGG CGTCATGTCG
CCGCTCTACA CCGTCTTCAA GTTCAAAGAC GGTGGCAATG ACTTTTATGA GCACTACTTC
AAGACAACCG GCTGGCACAC CTACATGCGG CAGGCATCCA GTACAGGCGC GCGGCATGAT
CGAATGGCCA TCTCCAGCGA CGATTTCATG GCCATGCCTT TGCCTGTTCC GACACCGAAG
GAACAACAAA AAATCGCCGA GTGCCTGAGT TCGGTGGACG CGCTGATGGC CGCGCAAGCG
CGGAAAGTGG ACGCGCTCAA GACCCATAAA AAAGGGCTGA TGCAGCAGCT TTTCCCCACG
GAGGGCGAAA CCCAACCCCG CCTGCGCTTC CCCGAATTCC AAAACGCCGG GGAGTGGAAC
AAGACGACCT TGGGTGAAGC AGCGACATTC TTCAACGGCC GAGCATACAA ACAGGAAGAA
CTGCTTGAAT CCGGAAAGTA TCCAGTTCTC CGCGTTGGAA ATTTCTTCAC CAACAACAAT
TGGTATTACT CAGACCTTGA ACTGGATGAG ACAAAGTATT GTGACAAAGG CGATTTGCTT
TACGCATGGT CGGCGTCGTT CGGGCCGCGT ATGTGGCACG GGGTAAAAGT GATTTATCAC
TACCACATCT GGAAGGTCGA ACAACACAGT GGAATAGACC GACAGTTCCT TTTCATCACA
CTCGAAAATG AAACTGAGAG GATGAAATCC AACTCAGCAA ATGGATTGGG ACTTCTGCAC
ATTACGAAGG GAACCATCGA GGGCTGGGAC ACTGCATTCC CATCACCGCC AGAACAACAC
CGCATCGCCT CCTGCCTGAG CAGCCTCGAC GCCCTGATCA CCCTGGAGAC CCAAAAGCTC
GAAGCCCTCA AGACCCACAA GAAAGGGCTG ATGCAGCAGC TTTTCCCAGT ACTCAACGAG
GTGCAGGGAT GA
 
Protein sequence
MATRTKQKNR DEKITRVLTN SAEFGVMDQR DFFDKEIATQ GNLESYFVVE LGSYVYNPRI 
SATAPVGPIS KNKVGTGVMS PLYTVFKFKD GGNDFYEHYF KTTGWHTYMR QASSTGARHD
RMAISSDDFM AMPLPVPTPK EQQKIAECLS SVDALMAAQA RKVDALKTHK KGLMQQLFPT
EGETQPRLRF PEFQNAGEWN KTTLGEAATF FNGRAYKQEE LLESGKYPVL RVGNFFTNNN
WYYSDLELDE TKYCDKGDLL YAWSASFGPR MWHGVKVIYH YHIWKVEQHS GIDRQFLFIT
LENETERMKS NSANGLGLLH ITKGTIEGWD TAFPSPPEQH RIASCLSSLD ALITLETQKL
EALKTHKKGL MQQLFPVLNE VQG