Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_2342 |
Symbol | |
ID | 7134816 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 2087899 |
End bp | 2088756 |
Gene Length | 858 bp |
Protein Length | 285 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 643530706 |
Product | RNA polymerase sigm-70 factor family |
Protein accession | YP_002426733 |
Protein GI | 218665176 |
COG category | [K] Transcription |
COG ID | [COG0568] DNA-directed RNA polymerase, sigma subunit (sigma70/sigma32) |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.127683 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCACACTG AAGCCAGAGA GTTAGCGGGG TCAGATATTC CGGAGATGGG TCCGGTCACC GATCCGCCGC CTCTGAGTGA TTTCGTGGAC GACGAAAATG GCGGGCCGTT TCTCAGCCAG AAGCAGGAGC TGCAACTCAT CCGGCGCTTG CGTCGGGGTG ACGAGTGCGC CCGCGCCACA CTGATCTCCG CGCACATGCC GTTGGTGCGG GCGGTCGCCA GGGGTTATCG CAATAAAGGA CTCAGTCAGG AAGACCTCCT TCAGGAGGGT TACATGGGTC TACTGCGTGC CGTCGACCGC TTTCAGGAAG GCCTCGGCAC ACGTTTCTCC AGTTATGCGA CCTGGTGGAT CCGGGAGGCT ATGCAGCGGG CGCTCATCCG TTCCCGCTTC ATCCGCCTGC CCGATTACCT TGCCAAGTCC CTGCACGCTT ATATGCAGAG CGGGGCGGAG GAAGACAGCG ACGCCGGTGT GCGCAGGGAG CAGCGGCGTG AAGCCCTAGG GGTGCGCGAG AGCACCATGC GCGCCCTGGA TTTCGCCGAT ATCCGCGTCT TCTCGCTCGA CGAGGAAATA TCCGACGGAC CGGGCCGCAT CGAACAGGTG ACCGGCGACG TTGCCAGTCC GGACAGCGAC TATGACCGTG ATGCCATCTG CAAGGCACTG CGGGAGCATC TGACCGAACT CAATGAAAAA CAGCGGGAGG TCATGGTCTT TCGCTACGGC ATGCATGGTG ACGCGCCCAT GACCCTGGAA GCCGTCGCCG AGCGTATGGG CGTCAGTCGC GAGGCGGTAA GACAGTTGCA GGTGCGGGCA CTGACCCGTC TGCGTCAGTC GTTGAGCGAG AGCGGCTGGG GTTGCTGA
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Protein sequence | MHTEARELAG SDIPEMGPVT DPPPLSDFVD DENGGPFLSQ KQELQLIRRL RRGDECARAT LISAHMPLVR AVARGYRNKG LSQEDLLQEG YMGLLRAVDR FQEGLGTRFS SYATWWIREA MQRALIRSRF IRLPDYLAKS LHAYMQSGAE EDSDAGVRRE QRREALGVRE STMRALDFAD IRVFSLDEEI SDGPGRIEQV TGDVASPDSD YDRDAICKAL REHLTELNEK QREVMVFRYG MHGDAPMTLE AVAERMGVSR EAVRQLQVRA LTRLRQSLSE SGWGC
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