| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_2210 |
|---|
| Symbol | |
|---|
| ID | 7135280 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | + |
|---|
| Start bp | 1960842 |
|---|
| End bp | 1961570 |
|---|
| Gene Length | 729 bp |
|---|
| Protein Length | 242 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 643530578 |
|---|
| Product | carboxymethylenebutenolidase family protein |
|---|
| Protein accession | YP_002426609 |
|---|
| Protein GI | 218667244 |
|---|
| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0412] Dienelactone hydrolase and related enzymes |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAGA TCACCTCTGA ATGGGTTCAA CTGGAAAACG GCCCACGCGC CTGGTATGCC
CGCCCCGTCG GCGTGGGTCC ATACCCGGCC GTGCTGGTCT TCATCGAGGC CTTCGGAGTC
AACGCACACT TTCAGGACGT GGCCCAGCGT CTTGCCCGGG CGGGTTATTG CGCCATGGTG
CCCGACCTGT ATCACGGCAA GACCTATGAT TATTCCGACT TTGACGGTGC CATCGGCCAC
CTCAAGACCC TGAACGACGC AGTCGTCATG CAGGAGGCGG GCCTGGCCAT CCAGGCACTG
CAGCAACGTG CCGAGGTGCG CAAGGACGCC ATCGGGGCGC TGGGGTTCTG TATGGGCGGA
CGCTACGCCT TCATGGCCAA TGCCATCCAT GCAGACCAGC TTCGCGCCGC GGTCGCCTTC
TACGGCGGCG GTATTGCCCC CGATCAGGAT TCCGTCGGAC GTAAGCCAGT GCTGCATCTG
GTGGACCAGA TGCGGGCGCC GCTGCTGCTG CTTTACGGCG CGGAGGACCA ATCCATCACC
CCCGAAGAAC ATGGTCGCAT CGCCACCGCG CTCAGCACCG CCGGCAAACG CTATACCCTG
ACCGTGTTTC CGGGTGCGCC ACACGGCTTT TTTGCGGATC CCCGGGGCAG CTTCCGTCCC
GATGCCGCGC AGGAAGGCTG GCGCCTGACC CTTGACCACT TCACCCGTTA CCTCGGAGCA
TCCGCATGA
|
|---|
| Protein sequence | MSQITSEWVQ LENGPRAWYA RPVGVGPYPA VLVFIEAFGV NAHFQDVAQR LARAGYCAMV
PDLYHGKTYD YSDFDGAIGH LKTLNDAVVM QEAGLAIQAL QQRAEVRKDA IGALGFCMGG
RYAFMANAIH ADQLRAAVAF YGGGIAPDQD SVGRKPVLHL VDQMRAPLLL LYGAEDQSIT
PEEHGRIATA LSTAGKRYTL TVFPGAPHGF FADPRGSFRP DAAQEGWRLT LDHFTRYLGA
SA
|
|---|
| |