Gene AFE_2129 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2129 
Symbol 
ID7135833 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1882734 
End bp1883144 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content56% 
IMG OID643530498 
Productvirulence-associated protein, putative 
Protein accessionYP_002426529 
Protein GI218668039 
COG category[R] General function prediction only 
COG ID[COG1487] Predicted nucleic acid-binding protein, contains PIN domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0156283 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGATCAAAT ACCTGCTGGA TACCAATATC TGCATCTTTA CTATCAAGAA CAAGCCACCG 
GAGATCCGCG AACAGTTCCG TCAGCACCAT GGGCAAATGG CTATCAGCAC CGTCACCTTG
ATGGAGTTGA TCTATGGCGC GGAGAAATCA CAGGTACCGG AACGCAACCT GGCCGAAGTT
GAAGGGTTCG CCGCCAGGCT GGAAGTGCTC GAATTCGGGA GCGAAGCCGC CAAGCATACT
GGGCAGCTCC GCGCAGAACT GGCCAAGATC GGCAAACCCA TCGGGCCTTA TGACCAGATG
ATCGCAGGCC ACGCCAGAAG CCTGGGATTG TTTGTCGTGA CCAACAACTT GCGGGAATTC
GAGCGCGTTC CGGGATTGCG GGTCATGGAT TGGCAGAGCT CACGCCTGTG A
 
Protein sequence
MIKYLLDTNI CIFTIKNKPP EIREQFRQHH GQMAISTVTL MELIYGAEKS QVPERNLAEV 
EGFAARLEVL EFGSEAAKHT GQLRAELAKI GKPIGPYDQM IAGHARSLGL FVVTNNLREF
ERVPGLRVMD WQSSRL