Gene AFE_2058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2058 
Symbol 
ID7135705 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1808070 
End bp1808405 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content54% 
IMG OID643530429 
Productpreprotein translocase, YajC subunit 
Protein accessionYP_002426461 
Protein GI218667628 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG1862] Preprotein translocase subunit YajC 
TIGRFAM ID[TIGR00739] preprotein translocase, YajC subunit 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.674684 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACTTTT CGCCTATCGC CAACGCTTAT GCCGGGACTG CGGCGGGGGC AGGTCCGGAC 
TCCTTTTTTA TCCAAGTCAT CCCGCTGGTT GCCATCTTCG CTATTTTCTA TTTCCTGCTG
ATCCGACCGC AGACCAAAAA GGCGAAGGAA CAACGCCAGT TGATCGCGAC GATCTCCAAA
GGCGATGAAG TGATTACCCA GGGTGGACTG GCCGGACGGA TCATGCAGGC GGGTGAGGAT
TACCTGCAAC TTGAGGTGGC TGAAGGAGTC ATTGTGAAGG TGCAGCGGGC CTCAGTGACG
TTGTTATTGC CCAAAGGGAC GCTGAAAAAA CTGTAA
 
Protein sequence
MNFSPIANAY AGTAAGAGPD SFFIQVIPLV AIFAIFYFLL IRPQTKKAKE QRQLIATISK 
GDEVITQGGL AGRIMQAGED YLQLEVAEGV IVKVQRASVT LLLPKGTLKK L