Gene AFE_2024 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_2024 
Symbol 
ID7136650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp1771228 
End bp1772148 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content61% 
IMG OID643530395 
Product6-phosphogluconate dehydrogenase-like protein 
Protein accessionYP_002426428 
Protein GI218667624 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1023] Predicted 6-phosphogluconate dehydrogenase 
TIGRFAM ID[TIGR00872] 6-phosphogluconate dehydrogenase (decarboxylating) 


Plasmid Coverage information

Num covering plasmid clones1 
Plasmid unclonability p-value0.021129 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGGCAATA AGGACATCGG AATGGTGGGC TTGGGCCGGA TGGGTGCCAA CATGGCACGG 
CGTCTGCACC TCAAGGGTAT GAAGGTCATC GCTTACAACC GTCATACCGA AAAAGCCACG 
GAGCTGGCCA AAGAAACCGG AATGCACGCC GCCAGCAGTC TGGAAGCTCT CGTTCAGGCG 
TTGCCTACCC CCCGGGTCCT CTGGCTCATG CTTCCCGCCG GAGAGGCCAC CCAGAGCCAC 
ATCGATTCCA TTCTTCCCTT GTTGAGCAGA AATGACATAC TGATCAACGG TGCCAATGCC 
TTTTACGAGG ACTCCATCGC CCAATCCCAA AAAGTGGAGG CGGTAGGGGT ACATTACATA 
GACGCCGGTG TTTCCGGCGG TATCTGGGGT CTGCGGGAGG GTTATGCCCT GATGGTCGGC 
GGCAGCCCGG AAGCCGTAGC CGAGGTAACG CCTTTTCTGG AGGCACTGGC GCCGGCCGTC 
GACAAAGGCT GGTTGCACTG TGGCCCCGTC GGCAGCGGTC ACTTCGTCAA AATGGTCCAC 
AATGGTATCG AATACGGCAT GATGCAGGCC CTTGCCGAAG GCTTCGCCAT TTTGCAGGGC 
AAAACCGAAT TCGGGCTGGA CCTCGCCAAG GTCGCCGAAA TGTGGCGCTA CGGCAGCGTC 
GTCCGCTCCT GGCTCCTCGA CCTCACCGCC GATACCCTCG CCAAAGATCA GGTGCTCGCC 
GATATCGCGC CGATAGTGGC GGACTCCGGC GAAGGCCTGT GGACCGCGCA GACGGCCCTC 
GCACTGAAAA TCCCCGCGCC GGTCATCACC CTCGCCCTGC AGATGCGCTG GGCTTCCCAG 
GGGCGCGACG ACTACGCCGC CAAACTCCTG GCGATGATGC GTAACGAGTT CGGTGGTCAC 
GCCGTGCAAA AGGAGGCCTG A
 
Protein sequence
MGNKDIGMVG LGRMGANMAR RLHLKGMKVI AYNRHTEKAT ELAKETGMHA ASSLEALVQA 
LPTPRVLWLM LPAGEATQSH IDSILPLLSR NDILINGANA FYEDSIAQSQ KVEAVGVHYI 
DAGVSGGIWG LREGYALMVG GSPEAVAEVT PFLEALAPAV DKGWLHCGPV GSGHFVKMVH 
NGIEYGMMQA LAEGFAILQG KTEFGLDLAK VAEMWRYGSV VRSWLLDLTA DTLAKDQVLA 
DIAPIVADSG EGLWTAQTAL ALKIPAPVIT LALQMRWASQ GRDDYAAKLL AMMRNEFGGH 
AVQKEA