Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1958 |
Symbol | |
ID | 7137208 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1710786 |
End bp | 1712516 |
Gene Length | 1731 bp |
Protein Length | 576 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 643530331 |
Product | outer membrane protein, OMP85 family |
Protein accession | YP_002426365 |
Protein GI | 218667177 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0729] Outer membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGGTGTTT CATTGCTGTA CGGTGGAATG GCTAACGCTG ATGAAGTAAC TTTCATTGTG GAAGGGATCT CCAGACCCCT GGCAGCGAAT CTCGCACATG CTCTCCCCCC TGCGGTGATC GGATCCCAGG CGGACCGTTT GGAAGAAGCA GAAATGGTGG CCGGTTTGCG CCTTAAGGAT GCGCTTGAAG CCTATGGTTA TTACGGCGCC ACATGGACGG AGAGCAGTAA AAACATTGCA AAGGGAAAAG TCCTCGTAAC CTTCTCCGTC ACCCCTGGGC GGCCTGTTCT GGTCCGCAAA ATCGACCTAA AATCCACCGG TGATGGATCC AAACTGCCGG CTTTACAAAA ACTGTTCTCT CAGTTTCCGC TTCATAAAGA AGGGGTTCTC AATCAGGTTA TTTATGAGGA CTGGAAGGGG AATGTCCTCT CACTCCTCAC CGCGCGCGGT TATGCGCAGG CCAGTTATTC GCGCCATGAG ATTCTTGTGG ATCGTGACCA GTTCTGGGCA GATATTTATT TGTGGCTCAA TACCGGACCA CGCTTCCGAG TTGGAGATAT TAATATCACT GGTGCGGAGC ACTATCCGCG ATGGTTCATT CAGCGCTATA TTTCTTTCAA GACAGGAGAC TGGTATTCAC CAAAGGCGCT GGCAGTCACT CAGAGCAATT TGCGCAATGC CGACCGGTTC TCTGATATTT CCGTGCATGG CGATTTGGGA AAAGCGATAA ATAATGCGAT ACCTGTTTCA GTTAACTTGA AAAGCATGCC GGGGCAACAC CTGAAAATAG GCGCCGGATA TAGCACTGAT ATCGGTCCTA ATGCAGCAAT TATATATGAT AATTATAATG CTTTCGAACA GGCACAGCAT GTTCGCGTTT CCATTTTGGC GGCGCAACTG AATCGCAATG CCAGTGTTAC CTATAGCTGG CCGGTCGGTG CGCGCCTGGG ATCCGAATAT ATTGCGCAAG GCAGTTATCA GAATCAAAAT CTGACCGCCT ATAATGCTAA CGAGATCCTT GCCAGCGCTG GTCGGCAGTG GTCATTGCGC AGCGATAACA GTCTGAGTAA AGGTGAAACC ATAGAGGCCT TGGTTAATTT TGAGGACGCC AACTACAATG TGGCTGGACA GTTTAATACG AGCTTGTATA TCTATCCGTC GCTACAATAT AGCATACAAA ACTTCCGCAA TATCTTGCGC CCCATAGCCG GCTATACACT GACGGCCAGG ATTGAGGGTG CCAGCAAGGT ATGGGGTAGC GATGCAAATT TTATCCGCTT TAGCGCTCAG GGAGAATGGC GCAGGCGTTT GGGTCAGGAC TGGGTCCTCG GCACCCATGC CAAACTGGGG GCAATGTGGT TAACTGGGTC CATTGGCGAA CTGCCACCCA ATCTGCGATT TTTCGCAGGT GGGCAAAATA GCCTGCCCGG TTATGCCTAT CAATCGCAGG GGCCATTGGC TGTGAACGGT GAAGTGGAAG GTGGGCGTCT TCTTGCCGTT GGTGGCTTCG ATATTCAGCG CTTTGTCGCC AAAAACTGGG CGGTCGTCGC ATTTTATGAT GTGGGTAATG CATTCAACAG TTGGTCCAGT TTTCATGCGC TTCAAGATGT TGGGCTAGGC GTGCGCTGGT ATTCCCCCGT TGGACCCATA CGCTTTGACG TGGCGCACCC ACTGGTTGCC CCGCAAACGC CTGCCGTCCG GGTCGCCTTC TCGGTAGGGT TCAGCTTGTG A
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Protein sequence | MGVSLLYGGM ANADEVTFIV EGISRPLAAN LAHALPPAVI GSQADRLEEA EMVAGLRLKD ALEAYGYYGA TWTESSKNIA KGKVLVTFSV TPGRPVLVRK IDLKSTGDGS KLPALQKLFS QFPLHKEGVL NQVIYEDWKG NVLSLLTARG YAQASYSRHE ILVDRDQFWA DIYLWLNTGP RFRVGDINIT GAEHYPRWFI QRYISFKTGD WYSPKALAVT QSNLRNADRF SDISVHGDLG KAINNAIPVS VNLKSMPGQH LKIGAGYSTD IGPNAAIIYD NYNAFEQAQH VRVSILAAQL NRNASVTYSW PVGARLGSEY IAQGSYQNQN LTAYNANEIL ASAGRQWSLR SDNSLSKGET IEALVNFEDA NYNVAGQFNT SLYIYPSLQY SIQNFRNILR PIAGYTLTAR IEGASKVWGS DANFIRFSAQ GEWRRRLGQD WVLGTHAKLG AMWLTGSIGE LPPNLRFFAG GQNSLPGYAY QSQGPLAVNG EVEGGRLLAV GGFDIQRFVA KNWAVVAFYD VGNAFNSWSS FHALQDVGLG VRWYSPVGPI RFDVAHPLVA PQTPAVRVAF SVGFSL
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