Gene AFE_1886 details

Gene Information

• Locus tag: AFE_1886
• Symbol: hflK
• ID: 7134098
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1644458
• End bp: 1645651
• Gene Length: 1194 bp
• Protein Length: 397 aa
• Translation table: 11
• GC content: 58%
• IMG OID: 643530262
• Product: hflK protein
• Protein accession: YP_002426300
• Protein GI: 218667451
• COG category: [O] Posttranslational modification, protein turnover, chaperones
• COG ID: [COG0330] Membrane protease subunits, stomatin/prohibitin homologs
• TIGRFAM ID: [TIGR01933] HflK protein

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCGTGGA GTGATCCGGG CGGGAACGGA AACAAAAACG ATAACAACCC CTGGGGACGG 
CGTCCTGGTG CGCAAAAGCC GGTTTTCGAT ATTCAGAAAA TTACCCGGGA GTTGAAAAAG 
CTGGGCGGTA TTTTCGGCTC GGGCGGTGGG CGCAGCGGTG GGCCGAAGAT GGATTACAAG 
TGGCTGCACC TCCTGCCTTT CCTGGTGATT GCCGTGCTGA TCCTGTTCTG GTTTGCTTCC 
GGCATTTATG TCGTGGGACC GGGTGAAGAA GGCGTGGTAC TGCGTTTTGG CAGAGAGGTC 
GGTATCAGTC AACCCGGTTT ACACTACCGC CTCCCTTTCC CCTTTGAGAG GGTATACTTG 
CTCAAAGTAG CGCAAAGCCG GCGTCTGGTT CTGGGCTATA GCGGTGCTGC CGACACCCGG 
AATCCCGGCA TGATGCTGAC CGTCGATGAA AGTGTGGTGG ATGTCCGTTT CGCTGTGCAG 
TATCGCATCG CCAATGCAGG AGATTACCTA TTTGCTACCG CAAATCCGGA TCAGTTGATT 
TCCTTCTGTG CGGAATCCGC CATGCGGGAG GTCGTGGGAC GCAGCAAAAT CGACAGTCTG 
CTCACTTCCG GCAAAGGCGA CATTCAGCAA CAGGTGCAGC AAATCACCCA AAACCTGCTG 
AGCCGTTATC ACGCGGGCGT GAGCGTTGAT TCGGTCCAAC TGTTGGAGGT GACGCCTCCC 
AAGGTCGTCC AGCCGGCGTT TGCGGATGTG GTAAAGGCGC GTGAAGACAT GGAACGGACG 
CGCGATGAAG CGCAGGCCTA TGCGAACGCA GTCGTTCCCA AAGCTACGGG GGAGGCCGCC 
GCGATGGTGA CGAACGCCGA AGGTTATAAA CAGCAGATGG TCGACCGGGC CAAGGGGGAC 
AGCGCACGCT TCACCGACAT TCTCCAGGCC TATCAGAAAA ATCCGAAAGT GGTGAGTGAG 
CGCATGTACT TGCGCACCAT GCAGGACATT CTGAGCCATA CCCCGAAAGT GATTGTCGAG 
AGCAAGGGAC AGCCCGTGAT AAATCTCCAT ATGCCTGCCA GGAGTCCTGC GGCGGTCAGC 
AGCCCGACGA GCTCAGCGGC AGAAACCGCG CCGACCGTAT CTGTGGCCCC GCCGGTCGCA 
CCGACGATCA GTCCGGTGGC GCTGCCGGCC GCTGTGTCAG GAGCCAGTTC ATGA 

 

Protein sequence

MPWSDPGGNG NKNDNNPWGR RPGAQKPVFD IQKITRELKK LGGIFGSGGG RSGGPKMDYK 
WLHLLPFLVI AVLILFWFAS GIYVVGPGEE GVVLRFGREV GISQPGLHYR LPFPFERVYL 
LKVAQSRRLV LGYSGAADTR NPGMMLTVDE SVVDVRFAVQ YRIANAGDYL FATANPDQLI 
SFCAESAMRE VVGRSKIDSL LTSGKGDIQQ QVQQITQNLL SRYHAGVSVD SVQLLEVTPP 
KVVQPAFADV VKAREDMERT RDEAQAYANA VVPKATGEAA AMVTNAEGYK QQMVDRAKGD 
SARFTDILQA YQKNPKVVSE RMYLRTMQDI LSHTPKVIVE SKGQPVINLH MPARSPAAVS 
SPTSSAAETA PTVSVAPPVA PTISPVALPA AVSGASS