Gene AFE_1868 details

Gene Information

• Locus tag: AFE_1868
• Symbol: lexA
• ID: 7136581
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1617594
• End bp: 1618211
• Gene Length: 618 bp
• Protein Length: 205 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643530244
• Product: LexA repressor
• Protein accession: YP_002426282
• Protein GI: 218665531
• COG category: [K] Transcription; [T] Signal transduction mechanisms
• COG ID: [COG1974] SOS-response transcriptional repressors (RecA-mediated autopeptidases)
• TIGRFAM ID: [TIGR00498] SOS regulatory protein LexA

Plasmid Coverage information

• Num covering plasmid clones: 11
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGATGAAC TTACCCCCCG GCAGTCCGAA ATTCTCGCCT GGATTCGTGC CCGCATGGCG 
GAAGACAGCC TGCCGCCTAC CCGTGCGGAG TTGATGCGGG CCTTTGACTT CCGTTCACCC 
AATGCTGCCG AAAGTCACCT GCGGGTATTG GCGCGCAAGG GCTATATCCT GCTGCAGAGT 
GGTACGGCCA GGGGCATCCG CCTCTGTGCA AGCGAAGAAG AAACCGGGTT GCCGCTGATC 
GGGCGAGTGG CCGCCGGGCA ACCCATGCTG GCCGAAGAGT TCCGGGAGGG ACAGTTGCCC 
GTCGACCCAA AGCTCTTTTC GCCAGGGGCC GATTACCTGT TGCGGGTGCA GGGCATGAGT 
ATGCGTGATG CCGGCATTCT CGATGGCGAT ATTCTCGCCG TCCGTCATGA CGCCTCGCTC 
ACTCTCCAGG ACGGTCAGAT GGTCGTGGCC CGGGTCAACG GCGAGGTGAC GGTCAAACGC 
TGGAAGCGGG ATGGCAAGCA GGTCTGGCTG CTGCCGGAAA ACCCGGATTT CTCTCCTATT 
TCTGTGGATT TGCAACGCGA TAGTCTGACA ATAGAAGGCG TGGTGGTCGG ACTGCTGCGT 
ATTGGAGGCA ACTTATGA 

 

Protein sequence

MDELTPRQSE ILAWIRARMA EDSLPPTRAE LMRAFDFRSP NAAESHLRVL ARKGYILLQS 
GTARGIRLCA SEEETGLPLI GRVAAGQPML AEEFREGQLP VDPKLFSPGA DYLLRVQGMS 
MRDAGILDGD ILAVRHDASL TLQDGQMVVA RVNGEVTVKR WKRDGKQVWL LPENPDFSPI 
SVDLQRDSLT IEGVVVGLLR IGGNL