| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1854 |
|---|
| Symbol | |
|---|
| ID | 7136677 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_011761 |
|---|
| Strand | - |
|---|
| Start bp | 1608650 |
|---|
| End bp | 1609906 |
|---|
| Gene Length | 1257 bp |
|---|
| Protein Length | 418 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | 643530231 |
|---|
| Product | pyridine nucleotide-disulfide oxidoreductase |
|---|
| Protein accession | YP_002426269 |
|---|
| Protein GI | 218666378 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG1252] NADH dehydrogenase, FAD-containing subunit |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGACTGAAC GTGTTCTCAT TCTCGGCGGC GGTTTTGCCG GCACCGCCGC CGCACGCGCG
CTCCGGGGTC AAGGGCTGGA GGTGACCCTG ATCGACCAGC GCAATTATCA TCTCTTCCAG
CCCCTCCTCT ACCAGGTGGC CGCCGGAGAT CTCCAGGCGG AGGCCATCGC CACGCCGCAA
AGGCGCCTCC TGCGCGGCGG CCTGCATTTT CGCTTGGGAC GGGTCGCCCG ATTGCGCCTC
CCCCAGCGTT CGATCCTGCT CGATGACGGT GACATCCTTT CCTATGATTA CCTATTCATC
GCCCTCGGCA CCGTCACCAA CTTTTTCGGC AATGCCGCCA TCGCCAACCA TGCCCTGCAG
ATCAAAGGCA TGGAAGCGGC GGAAGCGGTT CGTTCGCACA TCTTCAGTGC TCTGGAGGCA
GCCAGCCACT GCACAGACCC CGCCCAACAG CAGCGCTGGC TCAGCTTCGT CATTGCCGGA
GGCGGCCCCA CCGGGGTGGA ATTTTGCGCT GCCCTGCTGG AGCTCCTGCG CGTCGTGCTC
CCCCGCGACT ACCCGGAATT GCGCCTGGAA GATCTGCAAG TCACCCTGGT GCAGGGCAGC
GCCGCCCTGC TTCCCGGCTT TTCCGCGCCC CTGCAGGGCC AAGCCGCCCG CAAGCTGCAA
AAACTCGGCG CCCAACTGCG CTTTCACACC CATGTCCAGG GATTTGACGG GCAAATGGTG
CAATGCCAGC CGGACCCGGC TATTCCTGCC CGTACCCTCG TCTGGACCGC CGGCGTAACG
GCCAATCCTC TGGCGGCCAC CATGCCCGGT GCCCGGGGAC CCGGTGGACG AATCATCGTC
GATCCCCACC TGCGCCTGCC GGAATACCCC GAGGTCTTCA TCCTCGGCGA CCTGGCCTGT
AGCAGTAACG GTGAATTTTG GCCCCAGGTT GCACCCTTTG CCCTGCAGAG TGCCCGCCAC
GTCGCCCTAG TGCTGCAATC CCAACGGCAA GGGCGGCCCC TCCCTCCCCC TTTCGCCTAC
CGGGACCCTG GCAGCATGGC CGTCATCGGC CGTTTCGATG CGGTCTGCGA GATCGAACGC
TGGCATCTGC ACTGGCATGG CTGGAGTGCC TGGCTGCTCT GGCTGGGGCT GCACCTCTAC
CACATCATCG GCACCCGCAA TCGCCTGCTC ACCCTCCTCG ACTGGGGAAC GGATTATCTG
CGCCACAGCG CCGCCGTGGA AATCATTCGC TCTCCTCCCG ATTCTTCCGA TCCGTGA
|
|---|
| Protein sequence | MTERVLILGG GFAGTAAARA LRGQGLEVTL IDQRNYHLFQ PLLYQVAAGD LQAEAIATPQ
RRLLRGGLHF RLGRVARLRL PQRSILLDDG DILSYDYLFI ALGTVTNFFG NAAIANHALQ
IKGMEAAEAV RSHIFSALEA ASHCTDPAQQ QRWLSFVIAG GGPTGVEFCA ALLELLRVVL
PRDYPELRLE DLQVTLVQGS AALLPGFSAP LQGQAARKLQ KLGAQLRFHT HVQGFDGQMV
QCQPDPAIPA RTLVWTAGVT ANPLAATMPG ARGPGGRIIV DPHLRLPEYP EVFILGDLAC
SSNGEFWPQV APFALQSARH VALVLQSQRQ GRPLPPPFAY RDPGSMAVIG RFDAVCEIER
WHLHWHGWSA WLLWLGLHLY HIIGTRNRLL TLLDWGTDYL RHSAAVEIIR SPPDSSDP
|
|---|
| |