Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1675 |
Symbol | bioD-1 |
ID | 7135465 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 1449690 |
End bp | 1450445 |
Gene Length | 756 bp |
Protein Length | 251 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643530058 |
Product | dethiobiotin synthetase |
Protein accession | YP_002426097 |
Protein GI | 218666598 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0132] Dethiobiotin synthetase |
TIGRFAM ID | [TIGR00347] dethiobiotin synthase |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGGCC TCACCGGACT ATTTGTCACT GGTACTGACA CGGGCGTCGG CAAAACCTGG GTGGCGGTGG CACTGACCCG TCTCCTGGTG CAGCGGGGCC TATCGGTGCG CCCGCGCAAA CCGGTGGAAT CGGGGTGTGC CTCGGGCGAG GATGGCCTGC TGCCCCAGGA CGCGGCCGCG CTCTGGAAGG CTGCGGACAG TACCGAATCG CTGCAACAGG TTTGTGCTTA TCCACTGCGG GCGGCGCTCT CACCGGAGCG GGCTGCTGCC CTGGAAGGTC GGACGCTGAC TCTGGATCAA CTGGTAACCG CTTGCCAGTC GGGCATTGGC GCAGACGACT TCTTGCTAGT GGAAGGGGCT GGCGGCCTGC TCTCCCCGCT GGCGGCGGGA ACCACCAACG CCGACTTGGC CGCCGCACTG CGGCTGCCTG TGCTGGTAGT AGCCGCCGAT CGCCTCGGCG TCATCAACCA CACCCTGCTC ACTGTGGAGG TATTACAGCA CCGGGCATTA CCACTGGTTG GCGTGGTGCT GAACCAGACG GGGCCGGTGA TCGATCCGCT CTTGGATAAT GCCGCAGATT TGGCATGCTG GCTGGACTGT CCGGTAGAGC GAATACCGCA TCGGTCGGGG CACCACGCCA CCACGTGGAT GGGCATTGGT CCGTTTCTTC ATGGCCTTGC CAGCCGGCTT GCAGCCGCCC ATACCGCGCC AAAAGCAACC CCTCCCATCA CCGCAAACTG TGCGGCGCAG AAATGA
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Protein sequence | MAGLTGLFVT GTDTGVGKTW VAVALTRLLV QRGLSVRPRK PVESGCASGE DGLLPQDAAA LWKAADSTES LQQVCAYPLR AALSPERAAA LEGRTLTLDQ LVTACQSGIG ADDFLLVEGA GGLLSPLAAG TTNADLAAAL RLPVLVVAAD RLGVINHTLL TVEVLQHRAL PLVGVVLNQT GPVIDPLLDN AADLACWLDC PVERIPHRSG HHATTWMGIG PFLHGLASRL AAAHTAPKAT PPITANCAAQ K
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