Gene AFE_1569 details

Gene Information

• Locus tag: AFE_1569
• Symbol: ssb-2
• ID: 7134144
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 1356340
• End bp: 1356834
• Gene Length: 495 bp
• Protein Length: 164 aa
• Translation table: 11
• GC content: 60%
• IMG OID: 643529957
• Product: single-strand binding protein
• Protein accession: YP_002425996
• Protein GI: 218666847
• COG category: [L] Replication, recombination and repair
• COG ID: [COG0629] Single-stranded DNA-binding protein
• TIGRFAM ID: [TIGR00621] single stranded DNA-binding protein (ssb)

Plasmid Coverage information

• Num covering plasmid clones: 5
• Plasmid unclonability p-value: 0.285989
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGGAG TGAATAAAGT GATCTTGTTG GGCCATCTGG GGCGAGACCC GGAGATGCGG 
TACATGCCAG ACGGGACGGC GGTCGCCAAT ATGACCATCG CCACGTCGGA GTCCTACAAG 
GATCGGGACG GCAACCGCCA GGAGCGTACC GAGTGGCACC GCGTTGCACT CTTCGCGAGG 
ACGGCAGAAG TCGCTGGAGA ATATCTTCGG AAGGGAAGCC AGGCGTATAT CGAGGGACGT 
ATCCGCACCA GAAAATGGAC CGATAAGGAC GGTCAGGAGC GGTATTCCAC GGAGATCGTG 
GGCGACCAGC TCCAGTTGAT TGGTGGGCGC CGCGATACGC CAGAGAGTGG CAGTCCCGCA 
CCACAGCATG GTGGTGGGGG TGGCGGGGAC ATGGGGGCTG CACCGATGGA GGAATTTGAC 
GACGATATTC CCTTCATCAC CAAGGCGGAA ACCATCTGTC AACCACGCTG GCGGCTTCCG 
CGAGTGCGGT TCTGA 

 

Protein sequence

MAGVNKVILL GHLGRDPEMR YMPDGTAVAN MTIATSESYK DRDGNRQERT EWHRVALFAR 
TAEVAGEYLR KGSQAYIEGR IRTRKWTDKD GQERYSTEIV GDQLQLIGGR RDTPESGSPA 
PQHGGGGGGD MGAAPMEEFD DDIPFITKAE TICQPRWRLP RVRF