Gene AFE_1489 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1489 
Symbol 
ID7134612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp1288563 
End bp1289594 
Gene Length1032 bp 
Protein Length343 aa 
Translation table11 
GC content53% 
IMG OID643529877 
Productiron compound ABC transporter, periplasmic iron-binding protein, putative 
Protein accessionYP_002425917 
Protein GI218665443 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0614] ABC-type Fe3+-hydroxamate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones3 
Plasmid unclonability p-value0.236067 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGC GTTTTCTGTT CACGGTGATA TTAACAGGAA TCATGGGTAT TGCTTCGTTC 
CAGACCGCGA CCGCACAAGT CGTGATGGAC ATGTCCGGGC AGCCCGTGAA CATTCCCCAA 
CCATTAGACA AGGTTTTTGG CAGCGCACCC CCGGTCAATG CCCTCATTTA CACCCTGGAT 
CCCCATCTTC TCGCGGGATG GAATCTGCCC TTGTCGCCAT CGCAACGCAA ATATCTGGAT 
CCGGCGGCGC GTCATCTGCC CGTCCTGGGA GGTTGGTTCG GGCAGGGTTA CAATGCCGAT 
ATCGGCACGA TTTTACAGGC GCATCCTGAT CTCATCGTAT TCTGGTATCC CTATATGGGC 
CCCCAGGCGA GCGTGGTGAG CAAATTGCGT GCTCTGGGAC TTCCCGTATT AAACGTAAAA 
CTCCATGATC TGGCTGATTA TATCCAGGCG TATCGGCTGC TTGGCGAAGC GTTTCACAAG 
CAGACGCGTG CCGAAAACCT GATCCGCTAT CTTTCTGAAA AGAAAGACGC GCTTCAGAAT 
CTCCACACGC AGATTCCGGA ACCGAACCGG GTTTCCGTGT ATTACGCAGG CAGTCCGAAT 
GGATTGCGCA GTGGCTGCGA TGAGGCCATG CCGACCGCCA CCATACAATG GGCGGACGGG 
GAAAATGTTT TCCACTGCAC TATCAATCAC TTTCAAGGCT ATCAGCAAGT AAGCATGGGA 
CAGGTATTAC GCTGGAACCC TGAGGTGATT CTCAGTGATA ATCCCATATT TTTGGCCCAG 
GTGTATACCA ATCCCGCATG GGCGCCTTTG CAGGCGGTGC GGCACCATCG CGTTTACTAT 
ATCCCCCAGC AACCCTTCAG TTGGTTCAAC CGCCTGTATT CCTTTATGCA GATACTGGGT 
GCGCAATGGC TTGCCCATAA GCTTTATCCC CAACAATTTG CCTTCAGCGA CAAAGATATC 
CAGAATTTTT ATCAGCAGTT TCTCGGGGTG AAAATCAGCG ATGCCCGGCT TCGGGAGATC 
ATGCAGCCAT GA
 
Protein sequence
MRLRFLFTVI LTGIMGIASF QTATAQVVMD MSGQPVNIPQ PLDKVFGSAP PVNALIYTLD 
PHLLAGWNLP LSPSQRKYLD PAARHLPVLG GWFGQGYNAD IGTILQAHPD LIVFWYPYMG 
PQASVVSKLR ALGLPVLNVK LHDLADYIQA YRLLGEAFHK QTRAENLIRY LSEKKDALQN 
LHTQIPEPNR VSVYYAGSPN GLRSGCDEAM PTATIQWADG ENVFHCTINH FQGYQQVSMG 
QVLRWNPEVI LSDNPIFLAQ VYTNPAWAPL QAVRHHRVYY IPQQPFSWFN RLYSFMQILG 
AQWLAHKLYP QQFAFSDKDI QNFYQQFLGV KISDARLREI MQP