Gene AFE_1454 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1454 
SymbollpxD 
ID7134888 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp1256193 
End bp1257254 
Gene Length1062 bp 
Protein Length353 aa 
Translation table11 
GC content60% 
IMG OID643529842 
ProductUDP-3-O-3-hydroxymyristoyl glucosamine N-acyltransferase 
Protein accessionYP_002425882 
Protein GI218667954 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1044] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 
TIGRFAM ID[TIGR01853] UDP-3-O-[3-hydroxymyristoyl] glucosamine N-acyltransferase 


Plasmid Coverage information

Num covering plasmid clones4 
Plasmid unclonability p-value0.462569 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCGCGCG GCGTGTATCT CCTTGGCGAT CTTGCGCAGG TGGCAGGCGC TGAATTGCGC 
GGCGACGCCG GGTATCAGAT CAGCGCTGTG GCGCCGCTCG ATACAGCCGG CAGTGGGGAT 
CTCACTTTTT ATCACGACAT GCATTTGCGA GGTCTGTTAA AAACGAGCAA AGCAGGCGCC 
ATACTGATTG CTCCCCGGGA CGCGGAGCAA TTTTCCGGAA ACCGCCTTTT GACGGACAAT 
CCCTACGCGG CATTTGCGCG GGTCATGCAG CACATCTATC CGCAGGTTGC CCCTCGGCCC 
GGATTGCATC ATACGGCACA ACTGGCGCGT GACGCCCAGG TGGATCCGGA CGCGCGCATC 
GATGCGCATG TACAGATTGG AGCCGGAGCG GTGATTGCGA AAGGTGTCTG GCTGGAGGCC 
GGTACCTTTG TTGGCGCGGG TGCGGAGGTG GGGCAGGGAT CACATCTTTA TCCCGGTGTG 
AAGATTTATG GGGGCTGCAA AGTGGGCGCC GGCTGCGTCC TCCACGCGGG CGTGGTGATT 
GGCGCCGATG GCTTTGGTTT TGCAGAGGCA GACGGCCGCT TTTTGAAGAT CCCCCAGGTG 
GGTCGGGTAC TTATTGGAAA TAACGTGGAG GTTGGTGCCA ACTCCTGTAT CGACCGCGGT 
GCGCTGGCCG ATACGGTGAT CGAAGACGGG GTGAAAATAG ACAATCTGGT GCAGATCGGA 
CACAACGTCC AGATCGGCGC TCATACGGTT GTCGCTGGAC AGACAGGAAT TGCGGGGAGC 
GCGCGGATTG GCCGGCACTG CCGTATCGGC GGTCAGGTGG GTATTGCCGG TCACCTGGAA 
ATCGCCGATG GCTGTGTGAT CGCCGGGCAG AGCGCGGTGA CCCATTCCTT GCGTCGCGCC 
GGTGTATATT CGGGGGTGAT CCCTGTACAA GAGGCAAGCC ACTGGAGACG TATCGCCGCG 
CGTCTCGACG GACTGGATAC CTTGTTTCGC CGGATGAAGC GCGTCGAGCG TACACTTGAA 
CAGGATTTAT CTACCAACGG AGAGCCCACT GACCGTGAAT GA
 
Protein sequence
MARGVYLLGD LAQVAGAELR GDAGYQISAV APLDTAGSGD LTFYHDMHLR GLLKTSKAGA 
ILIAPRDAEQ FSGNRLLTDN PYAAFARVMQ HIYPQVAPRP GLHHTAQLAR DAQVDPDARI 
DAHVQIGAGA VIAKGVWLEA GTFVGAGAEV GQGSHLYPGV KIYGGCKVGA GCVLHAGVVI 
GADGFGFAEA DGRFLKIPQV GRVLIGNNVE VGANSCIDRG ALADTVIEDG VKIDNLVQIG 
HNVQIGAHTV VAGQTGIAGS ARIGRHCRIG GQVGIAGHLE IADGCVIAGQ SAVTHSLRRA 
GVYSGVIPVQ EASHWRRIAA RLDGLDTLFR RMKRVERTLE QDLSTNGEPT DRE