Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1450 |
Symbol | dxr |
ID | 7135018 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1250740 |
End bp | 1251921 |
Gene Length | 1182 bp |
Protein Length | 393 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643529838 |
Product | 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
Protein accession | YP_002425878 |
Protein GI | 218665633 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0743] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
TIGRFAM ID | [TIGR00243] 1-deoxy-D-xylulose 5-phosphate reductoisomerase |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.377566 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGGAAATGA CACGAGGCAT CTGCATACTC GGGGCTACGG GCTCCATCGG CAAGAGCACC CTGGATGTGG TGTCGCGCCA CCCCGACCAA TTCCGGATCG TCGCGCTTAC CGGCAATCAC CGTGTGGCAG AGATGCAGTT GCTGTGTCAG CAACATCATC CCGAGTTGGT GGTTATGGCT GCCCCGGAAG CGGCGCAGCA GTTGCGGGTG GGGCTAGGCG ATGCCGGCCT CAAGAAGATC CAGGTAGAGA GTGGCCCGGA GGCGCTTGCC GAAGCGGCAC GTATGTCCGG CGTCGATGAG GTGATGGCAG CCATTGTGGG CGCCGCCGGC CTGTTACCGA CCCTGGCCGC CGTAGAAGCC GGGAAAAAGG TCTATTTGGC CAACAAGGAA TGTCTGGTGA TGGCGGGCAA CCTCTTCATG GAGCGTGTGC GACAGCATCA GGTGACGCTG CTTCCCATCG ATAGCGAGCA CAATGCTGTA TTCCAGTGCT TTGCAGATGG CAAAGGCGTG CGCCGTATTC TGCTGACGGC TTCCGGAGGA CCGTTCCGGA CCTGGCCGGC GGAGCATCTG GCGGTGGTAA CGCCGGACCA GGCCTGTGCC CATCCCAACT GGGTCATGGG CCGAAAAATC TCCGTAGACT CTGCAACCAT GATGAATAAG GGGCTGGAGG TCATCGAGGC GCATTGGCTC TTTGACCTCC CCGCCTCCCG GATCGACGTG ATGATTCATC CCCAGAGCAT CATCCATTCC ATGGTGGAAT ATGTGGATGG CTCCGTGCTG GCGCAACTGG GCAACCCCGA TATGCGCACC CCCATTGCCC ATGCTCTGGC TTTTCCAGAG CGCATGGAAA GCGGGGTTTC GTCTCTGGAT CTGGCGCATG GGCCGGACCT TCAGTTCGAG GCACCAGACT TACAGCGGTT TCCTTGCCTG GCCCTCGCTT TTGATGCCCT GCAGGCAGGG GGAGCAGCAG CGACGGTGCT GAACGCGGCG AATGAGATTG CCGTACAGGC CTTCCTGGAA GGGCACCTGC CATTTCTACG AATTGCGGCC GTCGTCGAAG ATACCCTTGG TGAATTACAG CCCGCCGCCC CAGACCATCT GGACGATGTG CTGGCTATCG ACCAACTGGC ACGGGAAGTG GCTCTCCGCC ACCTGGCCCG GCATGGATCG GGTATGCAGT GA
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Protein sequence | MEMTRGICIL GATGSIGKST LDVVSRHPDQ FRIVALTGNH RVAEMQLLCQ QHHPELVVMA APEAAQQLRV GLGDAGLKKI QVESGPEALA EAARMSGVDE VMAAIVGAAG LLPTLAAVEA GKKVYLANKE CLVMAGNLFM ERVRQHQVTL LPIDSEHNAV FQCFADGKGV RRILLTASGG PFRTWPAEHL AVVTPDQACA HPNWVMGRKI SVDSATMMNK GLEVIEAHWL FDLPASRIDV MIHPQSIIHS MVEYVDGSVL AQLGNPDMRT PIAHALAFPE RMESGVSSLD LAHGPDLQFE APDLQRFPCL ALAFDALQAG GAAATVLNAA NEIAVQAFLE GHLPFLRIAA VVEDTLGELQ PAAPDHLDDV LAIDQLAREV ALRHLARHGS GMQ
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