| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_1448 |
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| Symbol | uppS |
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| ID | 7135274 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 1249221 |
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| End bp | 1249952 |
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| Gene Length | 732 bp |
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| Protein Length | 243 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643529836 |
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| Product | undecaprenyl diphosphate synthase |
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| Protein accession | YP_002425876 |
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| Protein GI | 218665933 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0020] Undecaprenyl pyrophosphate synthase |
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| TIGRFAM ID | [TIGR00055] undecaprenyl diphosphate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCCCCGCC ACATTGCCGT CATCATGGAT GGCAATGGTC GGTGGGCGTA CCGTCGGCAC
TTGCCACGGG TGGCCGGCCA TCGCCGCGGT GCCGAGGTGG TCCGGGAGAT GGTGCAGTCC
TGCGCGGATC TCGGTATTCC CTACCTGACG CTTTTCGCTT TCAGCACCGA GAACTGGCGA
CGTCCAGCCA TTGAAGTTCG TTTGCTGATG AATCTGTTCC GTCTTTTGCT GCGGCGGGAA
GCACGCAAGT TGCATGAGAA TGGCGTTCGT CTGCGTATCA TCGGTGATCG CAGCGCACTG
GATCCGGAGA TATGCCAGCT CATCGATGAG GCGGAGGCGC TCACCCGCAA CAATCAGCGA
CTCCAGCTCA ATCTGGCAGT GAATTATGGC GGACGTTGGG ATATTGCACA GGCAGCACGA
GCAGCGATGG CGGCGGTACA GGCGGGGGAC CTCGCCCTTG AAGACTTCTC CGCCGCACAT
ATTGCCCGGC ATCTCTGTCT GGCAGACATC CCCGAGCCCG ATCTGCTGAT CCGTACCGGT
GGCGAGGAGC GTATCAGTAA CTTTCTGCTT TGGCAGTTGG CTTATACCGA GTTTTACTTC
AGCGATACGC TGTGGCCGGA TTTCAACCGC GCAGCTCTGG AGCATGCGCT GCATTCTTTC
GCGCATCGGC AGCGGCGCTT CGGACGTACG GGCGATCAGG TGCTGGAGGG CGATTGCTCC
GTCAGCGACT GA
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| Protein sequence | MPRHIAVIMD GNGRWAYRRH LPRVAGHRRG AEVVREMVQS CADLGIPYLT LFAFSTENWR
RPAIEVRLLM NLFRLLLRRE ARKLHENGVR LRIIGDRSAL DPEICQLIDE AEALTRNNQR
LQLNLAVNYG GRWDIAQAAR AAMAAVQAGD LALEDFSAAH IARHLCLADI PEPDLLIRTG
GEERISNFLL WQLAYTEFYF SDTLWPDFNR AALEHALHSF AHRQRRFGRT GDQVLEGDCS
VSD
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