Gene AFE_1387 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1387 
Symbol 
ID7135609 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1200631 
End bp1201767 
Gene Length1137 bp 
Protein Length378 aa 
Translation table11 
GC content59% 
IMG OID643529779 
Producthypothetical protein 
Protein accessionYP_002425819 
Protein GI218667751 
COG category[S] Function unknown 
COG ID[COG4398] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGCAGGATG ATCGGCTTTT TCCCTATGGT CATGCCCGCG GGGCGGGTTG GCGCGAAGCA 
TTGTCCAGCG CTCTGGAGAT GGCGGGACCG CGGGTGCGTG GTGGTACGCT GGGCTTTCTC
TACGTCACCG ACAGCTTTGA GTCCGATTTG CCGGATATCC TGAGCGCTGT GCGGGAACAG
ACCGGGGTAC CCCACTGGAC GGGATGCGTG GGGGCCGGCA TCTGCGCGAC CGCGCAGGAA
TACCTGGACG AACCGGCACT GGCTTTTATG GTGACGGATT TTCCCGAAAC GGAATTTCGC
CTCTTTGCCG GTATGGGCCC TTACCGGACC GGCAAGAGTT GGCCGACCGG ACCGGGTCGT
CCACCCTACT TTGCTATTGT TCATGGTGAC TCCCAGACGC CGGATCTGCC TGATCTGGTC
CGTGATTTTG CCGGGCAGAT GGGCAGCGGT TTCATTACCG GGGGAATATG CAGCAGTCGC
ACCGACGGCG CGCAACTGGT GGATGAAGTC GTGCATGGCG GATTGAGCGG GGTGACGTTC
AGCGAAAATA TCGCCGTCGC TACCCGTCTG ACCCAGGGCT GCAGTCCCAT CGGGCCGATC
CATCACATCA ACGAAGCCCA CAACAATGTA ATTTCCCGTC TGGATGACCG TCCGGCGCTG
GATGTGTTTA ATGACGAGAC CTGCGACATC CTCTCCCGGG ATTTGCAGCG GGCGGCGGGC
TTCATTTTTG TTGCGATGCC GGTGAAGAAT GATGACCGTG GCGACTACAT GGTGCGTACC
CTGGTGGGCA TCGACATCGA GCGCAAGCTG CTGGCGATCG GCGAATATGC AGAGGCCGGT
CAGTCCCTGA TGTTCTGCAA GCGGGATAGC GGTACGGCGG GCGAGGATCT CGAACGTATG
CTCTCGGACA TCAGCCGCCT GGCGGATGGA AGAAAGATCC GTGGGGGTCT TTATTTCACT
TGTGTTTGGC GCGGCCAGAA TCTGTTTGGC CCCGATTCTG CGGAATTGCG GATGATCCGG
GACGGTCTGG GTGACTTCCC GTTGGTGGGT TTTTTTGCCA ATGCCGAGAT TTCTCATGAT
AAAATATACG GTTATACAGG GGTGCTTACC CTGTTTCTGG ATGCACCCAC TTCCTGA
 
Protein sequence
MQDDRLFPYG HARGAGWREA LSSALEMAGP RVRGGTLGFL YVTDSFESDL PDILSAVREQ 
TGVPHWTGCV GAGICATAQE YLDEPALAFM VTDFPETEFR LFAGMGPYRT GKSWPTGPGR
PPYFAIVHGD SQTPDLPDLV RDFAGQMGSG FITGGICSSR TDGAQLVDEV VHGGLSGVTF
SENIAVATRL TQGCSPIGPI HHINEAHNNV ISRLDDRPAL DVFNDETCDI LSRDLQRAAG
FIFVAMPVKN DDRGDYMVRT LVGIDIERKL LAIGEYAEAG QSLMFCKRDS GTAGEDLERM
LSDISRLADG RKIRGGLYFT CVWRGQNLFG PDSAELRMIR DGLGDFPLVG FFANAEISHD
KIYGYTGVLT LFLDAPTS