Gene AFE_1372 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1372 
Symbol 
ID7136325 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp1189572 
End bp1190738 
Gene Length1167 bp 
Protein Length388 aa 
Translation table11 
GC content64% 
IMG OID643529767 
Productfic family protein 
Protein accessionYP_002425807 
Protein GI218666504 
COG category[S] Function unknown 
COG ID[COG3177] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAGCCGC TGCTGATCGG CGCCGACTCC AAGCACCGGG CGGCACTGAC CGATTTGGCG 
GTCGAACTGG CCGCCAGGAG TGCTGGCTTT CGCCGCTCCC TGCCCGACAG CTTGTTCGGC
TCGCTTGCCA CCCTCGTGCG GGCGATGAAC TGCTACTACA GCAACCTGAT CGAGGGCCAC
GACACGCACC CGATCGACAT CGAGCGCGCG CTCAAGGACG ATTACAGTCA GGACGCCAAG
AAGCGCGACC TGCAGCTTGA GGCCAAGGCT CATATCGCCG TTCAGCACTG GATCGACACC
GGCGGGCTCA AGGCTCCAGC CACGACAACC GACGCGATCC TCGAAATCCA CCGGCGCTTT
TGCGAATTGC TGCCCGAAGA ACTGCTGTGG ATCGAAGACC CACAAACCAA AGAGAAGATC
AGGGTCATCC CCGGTGAACT GCGCCAGCGC AACGTGCAGG TCGGCCGGCA TATCCCGGTC
AGCGCACCGG CCGTGCCACA CTTCCTCAAG CGCTACGAGG AGGTCTATGC GAAGCTCGGC
AAGACGGAGA CCATTATCGC AACGGCAGCG GCGCACCATC GCCTGGCATG GATTCACCCG
TTCTTGGACG GCAACGGCCG CGTCGCGCGC CTCGTCTCGC ATGCCACGCT GCTGGACGCG
CTCGATACCG GCGCGGTCTG GTCGATTGCG CGCGGGCTCG CGCGCAACGT CCACGAATAC
AAAAGCCACC TCGCCGCCTG CGACGAGACG CGCCGCAACG ATCTCGATGG GCGGGGGAAC
CTCAGCGAAG AAAACCTCGC AGCTTTCACG GAATTCTTCC TGACCACCTG CCTCGATCAG
GTGAAATTCA TGGAAGGGCT GATGCAGCCC GACCAGCTTC GTACGCGCAT CCTCACATGG
GCCGAGGAGG AAATGCGCCT GAACAAGCTG CCGCCCAAGG CCAACAACAT CCTCGAAGCG
CTGCTCTATC GCGGCGATCT GCCGCGCGGC GATACTGCCA CCATCGTCGG GACCGGCGAG
CGTCAGGCCC GCCGCGTCGT TTCCGCCCTT ATCGACTATG GCGTGGTCAC CTCCGAGAGC
ACGCGCGCAC CGCTGCACCT CACCTTCCCC GCAACGCTCG CTTCACGCTG GATGCCCGGA
CTGTTTCCAG AGAAGACAGA TCGATAG
 
Protein sequence
MEPLLIGADS KHRAALTDLA VELAARSAGF RRSLPDSLFG SLATLVRAMN CYYSNLIEGH 
DTHPIDIERA LKDDYSQDAK KRDLQLEAKA HIAVQHWIDT GGLKAPATTT DAILEIHRRF
CELLPEELLW IEDPQTKEKI RVIPGELRQR NVQVGRHIPV SAPAVPHFLK RYEEVYAKLG
KTETIIATAA AHHRLAWIHP FLDGNGRVAR LVSHATLLDA LDTGAVWSIA RGLARNVHEY
KSHLAACDET RRNDLDGRGN LSEENLAAFT EFFLTTCLDQ VKFMEGLMQP DQLRTRILTW
AEEEMRLNKL PPKANNILEA LLYRGDLPRG DTATIVGTGE RQARRVVSAL IDYGVVTSES
TRAPLHLTFP ATLASRWMPG LFPEKTDR