Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1362 |
Symbol | |
ID | 7135145 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1177463 |
End bp | 1177891 |
Gene Length | 429 bp |
Protein Length | 142 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 643529757 |
Product | plasmid stability protein, putative |
Protein accession | YP_002425797 |
Protein GI | 218667390 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00298137 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATTTTGC TGGATACCAA CGTCTTGTCC GAGTTCATGC GCCCGGCCCC GTCCCTTCAG GTCGTGGCGT GGCTTGATGC ACAAGCGGCT GAGCAGGTAT GGGTCTGTGC CATCAGCCGT GCCGAAGTTG AACTGGGTGT TGCCTTGTTG CCGGATGGAC AGCGCAAACT GGGGCTGCAA GTGGCAGCCA GAGCGATGTT TTCTGAAGAA TTTGTCGGGC GTTGCCTGCC TTTCGACGAG CAAGCGGCAA CCTGTTACGC AGGCATTGTG GCATCGCGTA CCCGCCTTGG GCGCCCTATC AGTGTCGAAG ATGCACAGAT TGCAGCCATC GCCCTGACCC ATGGTTTGAC GCTGGCCACA CGCAATGAAC GTGATTTTGC ATGGATTGAA GATCTTTCGG TCGCGAACCC CTGGCAGACA GAGACATGA
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Protein sequence | MILLDTNVLS EFMRPAPSLQ VVAWLDAQAA EQVWVCAISR AEVELGVALL PDGQRKLGLQ VAARAMFSEE FVGRCLPFDE QAATCYAGIV ASRTRLGRPI SVEDAQIAAI ALTHGLTLAT RNERDFAWIE DLSVANPWQT ET
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