Gene AFE_1304 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_1304 
Symbol 
ID7134871 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand+ 
Start bp1135661 
End bp1136290 
Gene Length630 bp 
Protein Length209 aa 
Translation table11 
GC content52% 
IMG OID643529700 
Producttransposon resolvase 
Protein accessionYP_002425740 
Protein GI218666638 
COG category[L] Replication, recombination and repair 
COG ID[COG2452] Predicted site-specific integrase-resolvase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.0311544 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCAAAG CATACAGCAT GGGTGAATTC GCAAAACGTA TCGGTCGGTC GGCCCAGACG 
GTTCGACGGT GGGAGCGTGA AGGCAAATTG GTCGCCAAGC GTCTTCCATC TGGACATCGT 
TACTTCGACG AATCGGATGT GCGGCGCATG CTGGGCGGAG CCCCTGAAAA CCGAGCCACA 
ATCGTCTATT GCCGCGTGAG CAGTGCCGGG CAAAAAGACG ATCTGGCCTC GCAGGTGGAC 
GCAATGGAAA CCTATTGCCG TGGTGCTGGT ATTGCCGTGG ACGAATGGGT TCAGGAGATT 
GGCGGCGGCA TGAACTTCAA GCGCAAGCGT TTTCTCGGCA TCCTGGACCG TATGCAACGC 
GGCGAAATTG GAAAACTACT GGTGGCGCAC AAAGATCGAC TGGTGCGATT TGGGTACGAT 
CTCATTATGC ATCTGGCTAC TGAAAATGGC TGTGAAATCG TGGTTGTTAA CCAAAATTCC 
TTGTCTCCGC AACAGGAGAT GGTTGAAGAC TTGCTCTCCA TTGTTCATAC CTTCAGTTGC 
CGATTATATG GGATGCGTAA ATACAAGAAA CAATTGCGGG AAGATTATCC GGAATACAAG 
GTGGCAGAAC CCAAGGAACT TTTGCAATGA
 
Protein sequence
MSKAYSMGEF AKRIGRSAQT VRRWEREGKL VAKRLPSGHR YFDESDVRRM LGGAPENRAT 
IVYCRVSSAG QKDDLASQVD AMETYCRGAG IAVDEWVQEI GGGMNFKRKR FLGILDRMQR 
GEIGKLLVAH KDRLVRFGYD LIMHLATENG CEIVVVNQNS LSPQQEMVED LLSIVHTFSC 
RLYGMRKYKK QLREDYPEYK VAEPKELLQ