Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_1208 |
Symbol | |
ID | 7136525 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 1051042 |
End bp | 1054017 |
Gene Length | 2976 bp |
Protein Length | 991 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643529605 |
Product | outer membrane autotransporter TapA |
Protein accession | YP_002425645 |
Protein GI | 218667765 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0810] Periplasmic protein TonB, links inner and outer membranes |
TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACGCAA CCTACCGTTT AATTTTTAAC CGTGCCCTCG GCTGCCTGCA GGTCGCCTCG GAGTTGGCCA AGACCGGCGG GGGCGCTGCC GGAGGGGTGG TCGGTGCGGG GGTGCGAGGT GCTCCGGCGG TGGATAAGAA TCAGGTGCCG GCCCTGGGCC TGCTCCTGCG ACAGATTCTG GCCGTATTGC AGCCGGCGGT ACCCCTTTTG ATGGTGGGGG CGGGCGTGTT AGCTCCCGGT CTTACCGACG CGGCGACCGC AAAATACATC AGCAGCAGTA TCAGCAACCT CACCATTACC GGCAGTGGCA CGAGTCAGGT CAGATTGATA CCCGGCGGCA CCATCTCCGG AACGCTGGCC AACCAGGGCA CCATTAGTGG GGCTTCGGCA GCCGTCAGCC AAGTTTCTGC TACCGGTGGC ATTGGCACCC TGAGCAACAC TGGGACCATA TCTGGCACTA AGCAAGGCGT GTTGAATGGT GGCAGTATTG GTTTTCTACA GAATAGCGGT GGCCTCATTC AGGGCGGTAT CGTCGGGGTC TCTAACAATA GCAGTACCAG TCAGATAGGC ACGTTACTCA ATCAGGGGAC CATCAGCGGT AAGAGCTTTG GCGTGAGCAA TTACGGCACC ATTTCCAACC TGACCAATGA CGGGATTATT AGCGCGTCCA ATCCGTCTAA CTCTTACAGC AAAGCGGCGC TACTAAGTAA TGGCGGCACC ATTGGACTAT TGAGTAACAG TGGAACGATC AATGGCGGTA GTGCGCTTGC CATATTAACT TCATCTGGCC TCATTGGTAC GTTCAATAAT GATGGCGTGA TTACCAATAC CGGTTCGTCG GCTGCGGTGG TGGAGGTGGG AAATACCGGC ACGATCTCCA ACGGCGGGAC CATCGTCGGG GCAAGAACAG GTTTGGCTAT CAATGGCCAG GTTTCGACTG TGACTAACAC CGGAACAATC AGTGGTGTGC AGGTTATGTT TGGAGGGTTC GCTTCTGCCA TCAATAATTC TGGCCTGTTG GGAGGACCTA ACAGCCACAC AGGCATTGCG TTAATAACTA AGTCATCCTT GTTTAATGGC TCTTTGGCTG GCGTGCAGTC CACTTTGACA AATTCCGGTA TCATTCAGGG AGAAAACTAT GCCATCTCGA TTAGCAGCAA GCCGGCGACG GTCATTCTCG ATTCGGGTAG CGAAGTTATC GGTACTGTAA ACGCCGGTAC CACTGCCAGT ACGTTTTTGT TGAGTGGCGC GCAAAGCTGG GGTTCTGGAT CTCCCATCAT CGCGCCCCAG AGCACCCTTA CCATCACCCC GTCGGGCGAT GTAACTACGG CTGATATGTG GAGTGTGGCG ACGGTAAACA ATCAAGGAAC GCTGGCAGTG GGCGTTTTTG CGACGCCAAC GGGGGGTGGC ATCAGCCCTG CAAGCCAGAC CATCGCGGGT AACTACGCGC AGAGCGCCGG AGGGGTTCTG CAAATGGCCA TTACGCCCGC GGATAGCACG GCAGGCACCG ACTACAGTCA GCTTGTGGTG ACCGGAACTG CAAACCTGGC GGGTACCCTG GATGTCGTTC CCAACGGTGC GGCTTCGGCC TATACGGTAG GGGCAAATTA TGACCTGATT CATGCCGGAA GCATCGTGGG CAGCTTTGGC ACCGTTTCGG GCATGCAGGC GTTGGCGAAT TATGTCTCCC CCCAGATGAG CTACAGCGCC ACGGATGCGA CGCTCAAGAT GGCGGTGGCT GGCACGCCGA CGCCTGCACC TGCACCTGCA CCTGCACCTG CACCTGCACC TGCACCTGCA CCTGCACCTG CACCTGCACC TGCACCTGCA CCTGCACCTG CACCTGCACC TGCTCCTGCT CCTGCTCCTG CTCCTGCTCC TGCTCCTGCT CCTGCTCCTG CACCTGCACC TGCACCTGCA CCTGCACCTG CACCTGCACC CGCACCCGCA CCTGCACCCG CACCCGCACC CGCACCCGCA CCTGCACCCG CACCTGCACC CGGCGTAACG TTGAGTAATG CCCCAGCATT TCACAGTGGA CGCGCGGTAG CTGCTTCCAC CTACGCGGTG AATGTCGGGG GTGATGCGAT CGTCTCCAGC CTGCTGGATG GTGCGGGTCA GGTGCAGGGT TCCGATGGAC CGCGCTTTAC CGACAGCCGG ATTGGCAGTT GGGTGAAAGG CTTCGGCGCC TTCGGTCGCG CCAACGGCGC CTCGGTAGAG AACTATGGCG GTATTGCTGG CTACGGCCTG GCGATCAACC ATCACCTGGT TCTGGGTGCC GCATTTGCCG GATCGGGCAC GGGTACAAAT ACCGACGCGC AGCAGGTCAG TACCAATAGC TTCGGCGGAT TTGCCTACGC CATCGACACC CTGGGGCAAT TGCGCTTGTC AACCACCCTG GGGGCCGGGT ATCTGCATCA GTCGAGTAGC CGCAATATTT TCAATGCTCA GAACCAGTCC ATATACGAAA CTGCCGTCGG GGCTACGAAC GGCTGGTATT TCGGAGCCGG CTTGCAGGCA CAGTACCTGA TTCCACTGGG ACAAAATTTC CTGATGCCCT ATGGCCGCAT CGACTACGTG CACACCTATG TCAATGGATT CCAGGAAAAT GGCGCCAATA AACTGGTGAA CCTGAACATT GGCTACGGTT CATTGAATAC CAATGTCGCG GCCTTCAGCG GCGGGCTGCG GGCGGGTACG GATCTTTCCT TGGGGAGCAT GACCCTGATT CCCTGGGTGT CCGTGGGTGG TACCGGCTAT GCGGGGACCC TCAAGGTCGC CCAGGTGGAA ACCGTTGGCT TAACCAGCAC CACAGAAACC GGACTGGTCA CGCCTAATGG CGCGTTGGAT ACGGGAGCGG GCGTCACGCT GCGTGGGCAT CATACCCCGT GGACCGTGAA ACTGGCCTAT AACGGCCAGT TTGCTGGAGA TGTGCATCTC AATACCTTTG ACCTGCTGGC GAATTATCGC TGGTAA
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Protein sequence | MNATYRLIFN RALGCLQVAS ELAKTGGGAA GGVVGAGVRG APAVDKNQVP ALGLLLRQIL AVLQPAVPLL MVGAGVLAPG LTDAATAKYI SSSISNLTIT GSGTSQVRLI PGGTISGTLA NQGTISGASA AVSQVSATGG IGTLSNTGTI SGTKQGVLNG GSIGFLQNSG GLIQGGIVGV SNNSSTSQIG TLLNQGTISG KSFGVSNYGT ISNLTNDGII SASNPSNSYS KAALLSNGGT IGLLSNSGTI NGGSALAILT SSGLIGTFNN DGVITNTGSS AAVVEVGNTG TISNGGTIVG ARTGLAINGQ VSTVTNTGTI SGVQVMFGGF ASAINNSGLL GGPNSHTGIA LITKSSLFNG SLAGVQSTLT NSGIIQGENY AISISSKPAT VILDSGSEVI GTVNAGTTAS TFLLSGAQSW GSGSPIIAPQ STLTITPSGD VTTADMWSVA TVNNQGTLAV GVFATPTGGG ISPASQTIAG NYAQSAGGVL QMAITPADST AGTDYSQLVV TGTANLAGTL DVVPNGAASA YTVGANYDLI HAGSIVGSFG TVSGMQALAN YVSPQMSYSA TDATLKMAVA GTPTPAPAPA PAPAPAPAPA PAPAPAPAPA PAPAPAPAPA PAPAPAPAPA PAPAPAPAPA PAPAPAPAPA PAPAPAPAPA PAPAPAPGVT LSNAPAFHSG RAVAASTYAV NVGGDAIVSS LLDGAGQVQG SDGPRFTDSR IGSWVKGFGA FGRANGASVE NYGGIAGYGL AINHHLVLGA AFAGSGTGTN TDAQQVSTNS FGGFAYAIDT LGQLRLSTTL GAGYLHQSSS RNIFNAQNQS IYETAVGATN GWYFGAGLQA QYLIPLGQNF LMPYGRIDYV HTYVNGFQEN GANKLVNLNI GYGSLNTNVA AFSGGLRAGT DLSLGSMTLI PWVSVGGTGY AGTLKVAQVE TVGLTSTTET GLVTPNGALD TGAGVTLRGH HTPWTVKLAY NGQFAGDVHL NTFDLLANYR W
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