Gene AFE_0912 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0912 
Symbollon-1 
ID7136522 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp828005 
End bp830395 
Gene Length2391 bp 
Protein Length796 aa 
Translation table11 
GC content58% 
IMG OID643529312 
ProductATP-dependent protease La 
Protein accessionYP_002425390 
Protein GI218667386 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGTGCCGG TGTTGCCTCT GCGCGATGTT GTGGTGTTTC CGTTCATGGT AATCCCGCTT 
TTCGTGGGGC GGGCAAAGTC GATTCGCGCC CTGGAAGATG CGATGTCTGG TGAAAAGCAG
ATTCTGCTGG TATCGCAAAA AAATGCCGCG GACGATGACC CTCAACCGGA GAATATTTAC
CGGATCGGTA CGCTGGCGAC GATTCTGCAG TTGCTCAAGT TGCCCGATGG TACGGTCAAG
GTGCTGGTCG AAGGTACGGA CCGGGCTAAA ATCGTATCTT TCCTGCCGGC GGAGGAATCC
CTGCGCGCTC AGGTACAGAT CGTGGCCAGT GGTGCGGCAA ATGATCGTGA GCTGGAAGCG
CTCATGCGTT CGGTCAGCGC CCAGTTCGAG GCCTATGTCA AGCTGAACAA AAAAATCCCC
CCGGAGATTC TATCCACCCT GGCGAGCATG GATGATCCCG CACGACTGGC CGACACCGTT
GCGGCCCATC TCGGCCTCAA ACTCGAAGAA AAGCAGGAAA TTCTGGAGAA GGCGGACACC
CGCGCCCGGC TGGAGCATCT GCTGGGCATG ATGGAGTCTG AAATCGACCT GCTGCAGGTG
GAAAAGCGCA TCCGCGGTCG GGTCAAGCGG CAGATGGAAA AGAGTCAGCG CGAGTATTAT
CTGAATGAGC AGATGAAGGC TATTCAGAAA GAGCTGGGTG ATCTGTCCGA AGAGGGCGGT
GGTGAGTTGG ATGAGCTGGC ACGTAAAATC GACAAGGCTG GGATGCCGAA GGATGTACGG
GCCAAGGCCG ACGCCGAGTT GAAAAAACTG CGGATGATGA GCCCCATGTC GGCAGAGGCA
ACCGTGGTGC GCAACTATAT CGACTGGCTG GTGGGGGTGC CGTGGCGTAA ACGCAGCAAA
ATCACCAAGG ATCTCAAGCG GGCCAAGGCC ATTCTCGATG CGGATCATTA CGGCCTGGAA
GACGTCAAGG AGCGCATTCT CGAATATCTT GCCGTACAGG AACGGGTCGG CAACAGCCGC
GGTCCCATCC TGTGTCTGGT GGGTCCCCCC GGCGTGGGCA AGACCAGCCT GGGGCGCTCC
ATCGCTGCGG CGACCGGACG TAAATTCGTG CGGATGTCCT TGGGTGGTGT GCGCGACGAA
GCGGAAATCC GCGGACATCG GCGCACCTAC ATCGGGGCCC TGCCGGGTAA AATCATCCAG
AGCCTGGCCA AGATTGCTAC GCGCAATCCG CTGATGTTGT TGGATGAAGT GGATAAGATG
GCGATGGATT TCCGGGGGGA TCCGGCCTCC GCGCTTCTGG AAGTGCTGGA TCCCGAGCAG
AACGCGACGT TCAGCGACCA TTACCTGGAA GTGGACTTCA ATCTGTCCGA GGTGATGTTC
GTTACCACGG CGAACACACT CAATATCCCG GCCCCATTGA TGGACCGCAT GGAGGTAATC
CGGATCTCCG GATACACCGA AGACGAAAAG ATCCACATCG CCACCAAGTA TCTTCTGCCC
AAGCAGATAG AAAAGGCGGG GTTGCAGGAC GGGGAAATGC AGGTGTCCCA AACCGTCATC
CGGGATATCA TCCGTTACTA CACGCGGGAA GCGGGTGTGC GTAATCTGGA ACGGGAACTC
GCACGCATTT GCCGGAAGGT GGTAAAGGAA CTCCTGCTCG ACAAAAAGCG CACGCGTGTG
CAGGTTTCGG ATCGCAATCT GGACAAGTAT CTCGGGGTGC GCCGCTTCGA CTTTGGCAAG
GCGGAAAAGG AAAACCGTAT CGGTGAGGTC ACCGGACTGG CCTGGACTGA GGTGGGTGGT
GAGTTGCTGA GTATCGAGGC GGTGGTCGTG CCGGGTCGCG GCAAGCTGCT GATCACCGGT
AAGCTGGGCG ATGTCATGCA AGAATCCATC CAGGCGGCCA TGAGTGTGGT TCGTGCGCGG
TCGCGGGCGC TGGGCATTCC CGCAGATTTT TACCAGAACC ATGACTTCCA TATCCATGTG
CCGGAAGGCG CCACGCCAAA AGACGGGCCC AGCGCAGGCA TCGGCATGGC CACTGCCTTG
GTATCGGCAC TGACCAATAT TCCGGTACAT GCCACGGTCG CCATGACCGG GGAGATCACG
CTGCGCGGCG AGGTCCTGCC CATCGGTGGG TTAAAGGAGA AGTTGCTTGC GGCACATCGC
GGCGGCATCA GTACGGTCTT GATTCCGGCG GAGAATGAAA AGGATCTGCA GGAAATCCCC
AAAAACGTGC GTGATGCGCT GACCATCAAG GTGGTGCGGT GGATTGACGA GGTTCTGGCG
ATCGCGCTGG AGTCTTCGCC GACACCTTTG CCGCCTGAAA GCGGCGGCGA CGTGCTGGTT
GGTGTGGTGC CCGGCAAAGA GTCTTCCGAG GACAAGGCCA TGGCACATTA G
 
Protein sequence
MVPVLPLRDV VVFPFMVIPL FVGRAKSIRA LEDAMSGEKQ ILLVSQKNAA DDDPQPENIY 
RIGTLATILQ LLKLPDGTVK VLVEGTDRAK IVSFLPAEES LRAQVQIVAS GAANDRELEA
LMRSVSAQFE AYVKLNKKIP PEILSTLASM DDPARLADTV AAHLGLKLEE KQEILEKADT
RARLEHLLGM MESEIDLLQV EKRIRGRVKR QMEKSQREYY LNEQMKAIQK ELGDLSEEGG
GELDELARKI DKAGMPKDVR AKADAELKKL RMMSPMSAEA TVVRNYIDWL VGVPWRKRSK
ITKDLKRAKA ILDADHYGLE DVKERILEYL AVQERVGNSR GPILCLVGPP GVGKTSLGRS
IAAATGRKFV RMSLGGVRDE AEIRGHRRTY IGALPGKIIQ SLAKIATRNP LMLLDEVDKM
AMDFRGDPAS ALLEVLDPEQ NATFSDHYLE VDFNLSEVMF VTTANTLNIP APLMDRMEVI
RISGYTEDEK IHIATKYLLP KQIEKAGLQD GEMQVSQTVI RDIIRYYTRE AGVRNLEREL
ARICRKVVKE LLLDKKRTRV QVSDRNLDKY LGVRRFDFGK AEKENRIGEV TGLAWTEVGG
ELLSIEAVVV PGRGKLLITG KLGDVMQESI QAAMSVVRAR SRALGIPADF YQNHDFHIHV
PEGATPKDGP SAGIGMATAL VSALTNIPVH ATVAMTGEIT LRGEVLPIGG LKEKLLAAHR
GGISTVLIPA ENEKDLQEIP KNVRDALTIK VVRWIDEVLA IALESSPTPL PPESGGDVLV
GVVPGKESSE DKAMAH