Gene AFE_0872 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0872 
Symbollon-2 
ID7134091 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp793472 
End bp795838 
Gene Length2367 bp 
Protein Length788 aa 
Translation table11 
GC content64% 
IMG OID643529277 
ProductATP-dependent protease La 
Protein accessionYP_002425356 
Protein GI218666950 
COG category[O] Posttranslational modification, protein turnover, chaperones 
COG ID[COG0466] ATP-dependent Lon protease, bacterial type 
TIGRFAM ID[TIGR00763] ATP-dependent protease La 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACGATA CGCACACGGA GGCGCGCGAA AGCAGCAAAC TGGTATTACC GGAGGATGTC 
CTGCCGGTGC TGCCCATGCG CAATCTTGTC CTCTTCCCGG GAGTGGTTCT GCCCCTCGGT
ATCGGCCGCG CGCAATCGGT GGCGGCGGCC CAGGAGGCCA TCCGCCAGGA GCGCCCCATT
GCCTTGCTCT TGCAAAAGGA TCCAGAAAAT GACGCACCGG GTCCCGATGA TCTTTACCCG
GTGGGTACGG TGGCCGCCGT CCTGCGCTAT GTGACCACCG GGGATGGCGG CCACCACCTC
ATTGCTCAGG GAGAGGGCCG TTTCCGGGTG CGCGAATTTT TGCCGGATTA TCCCTTTCTG
GCGGCCCGTA TCGAACGTCT GGAGGAAACC ACTGCCACCG GTTCGGAGCT GGATGCCCGC
GTCCTGCACT TGCGCCAGCA GGCCACCGAA GCCCTCGCTC TCCTGCCGCA GGTGCCTCAG
GAGTTGGCCC AGGCCATCGC CCACGTGGAG CAGCCCGGGG CACTGGCGGA TCTGATCGCC
AACTTTCTCG ATCTCAAGCC CGAGGAGCGC CAGCAGATTC TGGAAAATCT TGACGTGCGC
AGCCGTCTGG AACAGATCTC GCAGTTTTTG GGCTATCGCA TCGAGGTCCT GAAGCTTACC
CACAAGATTG GCGAGCAGAC CAAGGAGGTC ATGGATCGCC GCCAGCGTGA GTATTTCCTG
CGCGAGCAAC TCAAGGCCAT TCAGCAAGAG TTGGGGGAAG GCGAGGAGGG CAACGGTGAG
ATGGAGGCTC TGGGTCATGC CATTGACGAG GCGCACTTGC CCGCCGAGGC GGAGGCGGTG
GCCCGCAAGG AGTTGCGTCG CCTGCAGCGG ATGCCCGAAG GGGCCGGCGA GTATGGCATG
GTGCGTAGTT ATATCGACGC CATTCTGGCC CTCCCCTGGA GCAAGGAGAC AGAGGAGCGC
ATCGACATCG GGGAAGCGCG GGGCATTCTC GACGAGGATC ACTACGACCT CGACAAGATC
AAGCGGCGCA TCCTGGAGCA TCTGGCGGTG CATCGCCTGA ATTCCAGCGG CAAGAGTCCC
ATTCTCTGCT TCGTGGGGCC GCCGGGGGTG GGCAAGACCT CTCTGGGCCA GAGCATCGCC
CGCGCCATGG GGCGCAAGTT TGTGCGCGTG AGCCTGGGCG GCGTCCATGA CGAGGCGGAG
ATCCGCGGCC ATCGGCGCAC CTATATCGGC GCCCTGCCGG GCAACATCCT TCAAGCCCTG
GGCAAGGTGG AGGTGCGCAA TCCGGTGATG CTCCTGGATG AGATCGACAA GCTCGGCGCC
GGTGGTTTCC ACGGCGATCC CGCTGCCGCC CTGCTGGAAG TGCTGGATCC GGAGCAGAAC
CGTACCTTTC GCGACACCTA TCTGGCCATG CCCTTTGATC TCAGCCACGT CTTTTTCATC
GCCACGGCCA ATATCCTGGA TACCATCCCC GGCCCCCTGC GGGACCGCAT GGAAATCATC
ACGCTCTCGG GTTATACGGA GGAGGACAAG ATGCATATCG CTTCCCGCTA CCTCCTGCCC
CGGCAGCGGG AAGCGGCGGG CCTGACGGCG GAGCAATTGG TGCTGGAAGA AGATACCTTG
CTGGCCCTCA TCCGCGGCTA TACCCGCGAG GCCGGCTGCC GCAACCTGGA GCGGGAGCTG
GGGGCCATTT GCCGCTGGGT GGCGGTGCGC GTCGCCGAGG GCAGCAGCAG CGGGATGCAG
GTTCGTCCCG ATGATCTGGT CACTGTTCTT GGTCCTCCGC ACTTTGAAAG CGAAGTTGCC
TCGCGGGTGG CCCTCCCCGG CGTGGCCACC GGTCTGGCCT GGACGCCGGT GGGCGGGGAT
ATCCTCTTCA TCGAGGCCAG CAAGAGCCCG GGCAACGGCC GCCTCATCCT GACCGGCCAG
CTCGGCGACG TCATGAAGGA GAGCGCCCAG GCGGCCATGA GTCTGGTCAA GGCGCGGGCG
GCGGACTGGC AGATTGCCCA GGAGAGCATC GACAAGAGCG ATATCCATAT CCACATCCCC
GCCGGTGCCA TCCCCAAGGA TGGTCCCAGC GCGGGGGTGA CTCTTGCTGT GGCGCTGATC
TCCTTGCTCA CCGGCCGCAA GGTGCGGCCG GATGTGGCCA TGACCGGCGA GATCAGTCTG
CGTGGCCTGG TTCTACCCGT AGGCGGGATC AAGGAAAAGG TCCTGGCGGC GCTGCGTGCC
GGTATTCACA CGGTGCTATT GCCGGCACGC AATCGCCGGG ATTACGAAGA CATCCCCGAG
AACGCCCGGC AACAACTTAC CTTCATCTGG ATAGAACGGG TGGAAGATGC AGTGGCGCAG
GCGCTGGAAA TGGGCCAGGA AAGGTAA
 
Protein sequence
MNDTHTEARE SSKLVLPEDV LPVLPMRNLV LFPGVVLPLG IGRAQSVAAA QEAIRQERPI 
ALLLQKDPEN DAPGPDDLYP VGTVAAVLRY VTTGDGGHHL IAQGEGRFRV REFLPDYPFL
AARIERLEET TATGSELDAR VLHLRQQATE ALALLPQVPQ ELAQAIAHVE QPGALADLIA
NFLDLKPEER QQILENLDVR SRLEQISQFL GYRIEVLKLT HKIGEQTKEV MDRRQREYFL
REQLKAIQQE LGEGEEGNGE MEALGHAIDE AHLPAEAEAV ARKELRRLQR MPEGAGEYGM
VRSYIDAILA LPWSKETEER IDIGEARGIL DEDHYDLDKI KRRILEHLAV HRLNSSGKSP
ILCFVGPPGV GKTSLGQSIA RAMGRKFVRV SLGGVHDEAE IRGHRRTYIG ALPGNILQAL
GKVEVRNPVM LLDEIDKLGA GGFHGDPAAA LLEVLDPEQN RTFRDTYLAM PFDLSHVFFI
ATANILDTIP GPLRDRMEII TLSGYTEEDK MHIASRYLLP RQREAAGLTA EQLVLEEDTL
LALIRGYTRE AGCRNLEREL GAICRWVAVR VAEGSSSGMQ VRPDDLVTVL GPPHFESEVA
SRVALPGVAT GLAWTPVGGD ILFIEASKSP GNGRLILTGQ LGDVMKESAQ AAMSLVKARA
ADWQIAQESI DKSDIHIHIP AGAIPKDGPS AGVTLAVALI SLLTGRKVRP DVAMTGEISL
RGLVLPVGGI KEKVLAALRA GIHTVLLPAR NRRDYEDIPE NARQQLTFIW IERVEDAVAQ
ALEMGQER