Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0753 |
Symbol | smc |
ID | 7134877 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 680283 |
End bp | 683735 |
Gene Length | 3453 bp |
Protein Length | 1150 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643529159 |
Product | chromosome segregation protein SMC |
Protein accession | YP_002425241 |
Protein GI | 218666509 |
COG category | [D] Cell cycle control, cell division, chromosome partitioning |
COG ID | [COG1196] Chromosome segregation ATPases |
TIGRFAM ID | [TIGR02168] chromosome segregation protein SMC, common bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTCT CGGCCATCAT CCTACAGGGC TTCAAATCCT TTCGCGAAAG TACGCGCATT CAGTTCAATG CCAATCCGGT GGTGATCATT GGCCCCAATG GCTGCGGGAA ATCCAACACC GTTGATGCCG TGCGCTGGGT ACTCGGTGAA TCCTCGGCAC GCCAACTGCG CGGTGGCACC CTCAGTGACG TGATCTCCAA TGGCGGCGGC AGTCGGCCGG CCGCATCGGT GGCGACAGTC GAACTGCGCT TCGATAACAG TGATGGGGCG GCACCGGGTG CCTTTGCCGG GGCGGCTGAA ATCAGCGTCC GACGCAGTCT GGACCGCAAG GGCGATGGCC ATTACCGAAT CAACGGCGCC CGCTGCCGGC GACGCGATGT GGCGGATCTG TTTCTCGGTA CGGGACTCGG CGGCAATGCT TATGCCATCG TTGAGCAGGG GACCATCGGG CGCATCGTCG ATGCGCGACC GGACGATCTG CGCGCCATTC TCGAAGAGGC GGGGGGCATC AGCCGATATA AGGAGCGTCG GCGGGAGACC ACACAACGCA TCGCCGAAAC GCGGGAGCAC CTTCAGCGCT TGTATGATAT CCACGGTGAG ATGGATGGCC AGTGGCAGCG CCTGCAGCGG CAGGCAGAGT CTGCGCAAAG ACTGCGCGCC CTACGGGTGG AGGAGCGCCA ATGGCAGTGG TGGAGTCTGG CCCTGCGCGT GGATGCCCTG GAAGCAGAGC GCCGGCAGAG CCTGGAGCAG CGCTCCCGGC TGCAGGACGA ATACCGAAGG GAGGAGCGCC TTCTCGATGC GGTGACCCAG TCCCTGGATC AACTCCGTGC GGAGGACCGG CGCATGCAGG AAGACATCGC CGCGGCACAG GGTGAACTGT ATGCGGTGCA GGCCCGGCAG AGCGATATGG AACATCAGCT GCGAGAGCAG CAAGCTGCCC TTCAGCGCGT GCAGACCAGT CTGGACCAGG GCCAGGCACA GCAGCAGAAA GTCCGGTCTG AGCAGATATG CCAGGCGGAA GACGAAAACC AGCGGCAGCA ACGTTTGCAG GATTTGGCTG TGCGACGGCA GGCACTGAGC GGCGAGGAGG ACAGTGCCCG ACGCTTGCGG CGGGAAGCGG AGCGGGGGCT CGAAAAACAG GATGAGGAAC GTCAGAACCA GCAACAGGCT CTGGCCGAAA TGCGTCGCAA ACGGGATGTG ACGATGGCGC AAATCCGCGA ACTGGAGCCT CGCTTGGAGG ACATCGAACG CCGCCTGCAG CGGCAGTCCG CGAACATACC CTCGGAGCGC GCCGCCATGC AAGCCCTGGC GGCGCGTTGC GGTACCACAG AAACCGTGTT GGCGGAAGCC GCATCGGAGC TTCGGGCACA TCGGGAAGCG CTGGAAACCC TCCAGAACCG GATCGCCGTT TTGCGAAATG CCCGCGACGA CACCCGGGCC AAGGCGCAGG AATATGGTGC CCGGCAGAAG GCGCTGGAGG GCCTGCTGCA GCGGCTGCAA AAACCGCAGG CGCAAAATGA CCCCGCCGGC TCCCGGCTGG TGGATCAGAT GCGCGTGCAG CCCGGCTGGG AGCGGGCGCT GGAGGAGGTC TTGGGCGAGC GCCTGAACGC TCTGGTGATG GAGGGCAACA ACATGGTCAC CCAGGGCAGC ATGTTGTGGG TGAGCACGGT CATGCCGGCC GAACTGCCGT CGGACACGTT GCTGCAGGTC TTGGAAATGC CCGAGTCTTT AACTTTGGGA TTGAGTGACT GGCTGTGGGG GCTGCGCATG GCGCCCGACT TGGCCTCTGC CCTCGATCAA CGTCACCAGC TACGGGCGGG AGAGGCCTGG ATTACGCCGC AGGGGGTGCT GGTGCATCGT TCCGGGGTCG CGTATCCGGA GCATGAAGAC GGAGCCAGCC TGCTCCAGTG CCGCCGTGAA TTGGCGGAAA ATTGGGAGTG TTTCCAGCGG GCGCAGGCGG ATGCAGCCGC TGCCCATGCC GCTTTGATCG CGGCGGAACA ACAGGCGCGC ACCCTGCAGG AGCAGGTCAG AACGGCAGAT GCCCGCTGGC AGGACATGAG CCGGCAAAGC GCCCGGGAGC GGGAGTCTCT GGCTCGTCTG CGCAGCCGGG TAGAGACAGA AGAGCAGCAG CGCGCGGAAA GGGCGGCTGA GTCCCAGCGC CTCGACGTCG AACGCAACGC CCTGGAAACT CGCTTGCATG GACTCCGTCA GGAACTGGCG GCTGACGAAA GCGGATGGCA GGCCCTCGAG CAGGTGGTGC TGGACTCCCA ACGGAGGACG GATACGTTGC GTCGCCGGGT GGACGAACTG CGCGGAATTC ATGGACGCGT GCGGGGGGAA TATCAGACGC TGGAACTCCG GCAGCAGCGC CTGCAGGCCG AATCGGAAGC AGCCATAACC CGTGCCGAAG ACCTGCAACA GCAGTGGGAC CAGCTTGCTG CCACTGTCGC CGAGAATGAA GGGGAACTGC TTCGGCTACA GGCCGCCCTG CCGGAAATGC TCAAGGCGCG AGATGCGGTG GGAGCATTGC GGGCAGGTCG TAGCGTGCAT CTGGAGGTCT TGCAGTCGGC GGCACAGACT GCAGGGCAGC AGATTCGCGA ACATGAAAGC CAGCGCCATG CCCTGGACAA GGGGTTGCGC GCCTTGCAGA AGTCCGAGGC CGCCGTCGAA CAGCAGCTCG CAGGCCTACA GGCGCGTCTG GATGAACTGC AGCAGCGTGC CGCAGTGCTT GCGCAGGATT TAGGCGACGA TCCGGGGCCT TGCCCGGATG CGACACGCTG CGAAGAGAGT CTTACCCGAA TCGGCGCGGC CATCGCCAGC CTTGGCAACG TGAATCTCGC CGCCGAAGAC GAGTTGCGGG AACTGGAGGG GCGCCGCGGT AACCTGCTGG CTCAGGTGGA AGATGTGGAA TCTGCTCTGT ACAGGCTGGC GGAGGCTATG GCGGCCATGG ATCTGGAGAC GACGGTTCGT TTTCGAGACA CCCTCGATAA GGTCAATCAG GCCTTGCAGG AACTCTTTGC CGTTCTTTTT GGCGGTGGAC AGGCGCAACT CAGTCTGGTT GGCGAGGATG TTCTGGAAGC TGGACTGGTG CTGCGTGCCC AGCCTCCGGG CAAGCGTAAC GCCACTCTGC AGCAGCTTTC CGGTGGCGAA AAGGCACTCA CCGCCATCGC GCTGGTGTTT GCCCTGTTCC ACCTGAACCC CGCGCCCTTC TGTATATTGG ATGAAGTGGA TGCGCCACTG GACGACGCAA ATGTGGGGAG ATTCTGTCAT CTGGTGCAGA AAATGGCGGC GCAGACCCAG TTTTTGATTG TGACCCACCG CAGCCTGACC ATGCAGGTCG CCGAGCAACT GGTGGGCGTC ACCATGACCG AACCGGGTGT CTCCCGTGTC GTACGAGTGG ATGTGGCGGA TACCCTGGCA CAGACAGCCA CCCATGAGGG AACTACGCCC TAG
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Protein sequence | MRLSAIILQG FKSFRESTRI QFNANPVVII GPNGCGKSNT VDAVRWVLGE SSARQLRGGT LSDVISNGGG SRPAASVATV ELRFDNSDGA APGAFAGAAE ISVRRSLDRK GDGHYRINGA RCRRRDVADL FLGTGLGGNA YAIVEQGTIG RIVDARPDDL RAILEEAGGI SRYKERRRET TQRIAETREH LQRLYDIHGE MDGQWQRLQR QAESAQRLRA LRVEERQWQW WSLALRVDAL EAERRQSLEQ RSRLQDEYRR EERLLDAVTQ SLDQLRAEDR RMQEDIAAAQ GELYAVQARQ SDMEHQLREQ QAALQRVQTS LDQGQAQQQK VRSEQICQAE DENQRQQRLQ DLAVRRQALS GEEDSARRLR REAERGLEKQ DEERQNQQQA LAEMRRKRDV TMAQIRELEP RLEDIERRLQ RQSANIPSER AAMQALAARC GTTETVLAEA ASELRAHREA LETLQNRIAV LRNARDDTRA KAQEYGARQK ALEGLLQRLQ KPQAQNDPAG SRLVDQMRVQ PGWERALEEV LGERLNALVM EGNNMVTQGS MLWVSTVMPA ELPSDTLLQV LEMPESLTLG LSDWLWGLRM APDLASALDQ RHQLRAGEAW ITPQGVLVHR SGVAYPEHED GASLLQCRRE LAENWECFQR AQADAAAAHA ALIAAEQQAR TLQEQVRTAD ARWQDMSRQS ARERESLARL RSRVETEEQQ RAERAAESQR LDVERNALET RLHGLRQELA ADESGWQALE QVVLDSQRRT DTLRRRVDEL RGIHGRVRGE YQTLELRQQR LQAESEAAIT RAEDLQQQWD QLAATVAENE GELLRLQAAL PEMLKARDAV GALRAGRSVH LEVLQSAAQT AGQQIREHES QRHALDKGLR ALQKSEAAVE QQLAGLQARL DELQQRAAVL AQDLGDDPGP CPDATRCEES LTRIGAAIAS LGNVNLAAED ELRELEGRRG NLLAQVEDVE SALYRLAEAM AAMDLETTVR FRDTLDKVNQ ALQELFAVLF GGGQAQLSLV GEDVLEAGLV LRAQPPGKRN ATLQQLSGGE KALTAIALVF ALFHLNPAPF CILDEVDAPL DDANVGRFCH LVQKMAAQTQ FLIVTHRSLT MQVAEQLVGV TMTEPGVSRV VRVDVADTLA QTATHEGTTP
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