Gene AFE_0734 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0734 
SymbolaroK 
ID7137122 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp663307 
End bp663846 
Gene Length540 bp 
Protein Length179 aa 
Translation table11 
GC content62% 
IMG OID643529140 
Productshikimate kinase 
Protein accessionYP_002425222 
Protein GI218666988 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0703] Shikimate kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGGCA GCATCATCCT CATCGGGCCC ATGGGATCGG GCAAATCGAC CATCGGGCGG 
CTTCTGGCCG CCCGCTTGCG TCTTCCTTAT GTGGATAGCG ACGCGCTCAT CGTCCATCAT
ACGGGGGTGG ATATTCCCAC TATTTTTGAG ATCGAGGGGG AATCGGGTTT CCGCGAACGG
GAACGCAAAA TCATCGCCGA CCTCTCCACC TGGAGCGAAC CGATGGTACT CGCCACCGGC
GGCGGCGCCA TACTCGACCC GGCCAATCGA CATCATCTGC GGCAGATGGG CCAGGTCATT
CATCTGGATA TCAGCGTCGA CGAGCAACTC AGACGTATTC GCCATGACCG CAACCGCCCA
CTGCTGCAAA ATACGGACCT TGATTGCCGT CTGAAAACAC TGGCGGAGCA GCGTAATACC
CTGTACCGGG AGACTGCCCA CTGGCGGGTG GTGGGGGACG GTCTGCGCTC GGATCAGGTT
CTGCGCCGGA TACTGCGCCA CCTCCAGCAG CGGGCAGGGC ACCCCCCCGT CCGGGGGTAG
 
Protein sequence
MTGSIILIGP MGSGKSTIGR LLAARLRLPY VDSDALIVHH TGVDIPTIFE IEGESGFRER 
ERKIIADLST WSEPMVLATG GGAILDPANR HHLRQMGQVI HLDISVDEQL RRIRHDRNRP
LLQNTDLDCR LKTLAEQRNT LYRETAHWRV VGDGLRSDQV LRRILRHLQQ RAGHPPVRG