Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0673 |
Symbol | iscS-3 |
ID | 7134377 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 601965 |
End bp | 603188 |
Gene Length | 1224 bp |
Protein Length | 407 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 643529079 |
Product | cysteine desulfurase IscS |
Protein accession | YP_002425161 |
Protein GI | 218667898 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG1104] Cysteine sulfinate desulfinase/cysteine desulfurase and related enzymes |
TIGRFAM ID | [TIGR02006] cysteine desulfurase IscS [TIGR03402] cysteine desulfurase NifS |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.752721 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGGATCG ATCCGGATCG TCCCATTTAT CTGGACTACC AGGCGACGAC CCCCGTCGAC CCGATCGTCC TGGAACAGAT GCTGCCCTTT CTGACCCATG ACTTTGGTAA TGCGGCCAGC CGTTCCCATC CCTACGGCTG GACGGCGGAA AAGGCGGTGG AGAAGGCGCG TCAGCAGGTT GCGGATACCA TCCACGCCGA CCCCCGTGAA ATCGTCTGGA CGTCGGGCGC GACGGAAGCG ACCAATCTGG CCCTCAAGGG CGCGGCGCAT TTTTATTCCG GCAAAGGCAG GCATCTCGTC ACCCTGCGTA CCGAACACAA GGCGACTCTG GACACTTGTC GCCAACTGGA GCGCGAAGGC TTTGAAGTTA CCTATCTGGA AGTACAGGAA GACGGTCTGG TCGACCTCCA GGTCTTTGAA GCGGCCCTCC GTCCAGATAC CATCATGGCT TCCGTGCTGT ATGTGAACAA CGAAATCGGC GTCATCCAGC CCATGGAAGA AATCGGCAGG ATACTGCGCG CCCACAAGAT ATTGTTCCAT GTGGATGCGG TGCAGGCCCT GGGCAAGATC CCGGTAGATG TGGAAGCCAT CCAGGCGGAC ATGATGAGTC TATCCGGACA TAAGATCTAC GGACCCAAGG GCATTGGTGC CCTCTACGTG CGGCGTAAGC CCCGGGTGCG GGTTGAGGCG CAGATACATG GTGGAGGCCA CGAGCGCGGC ATGCGTTCCG GGACTTTGCC TACGCACCAG ATCGTCGGCA TGGGTGCGGC AGCCGAACTG GCCGTGCAGT CGATGGAGAG CGATGGCAAA CGTATCCGCC AGTTACGTGA CCGTCTGCTC GAGGGCATTC GGGAACGGGT GGAAGAAACC TATATCAATG GCAACATGGA ACACCGGGTG CCGCACAACC TCAATATCAG CTTTGCCTTT GTGGAAGGCG AGTCGCTGAT CATGGCGCTG AAGGAAATTG CCGTATCCAG CGGATCGGCC TGTACCTCGG CCAGCCTGGA GCCTTCTTAT GTGCTCCGCG CCTTGGGTAA GTCCGATGAG CTGGCGCACA GTTCCATCCG CTTTGGCATC GGTCGCTACA CGACGGAAGA GGAAATTGAC GCTACTATCG GACTGATTGC TGCGAAGGTG GACAAGTTAC GGGAGTTGTC TCCCCTCTGG GAGATGCATC AGGAAGGCAT TGATATCCAC AGCATTCAGT GGGCCGCGCA CTAA
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Protein sequence | MRIDPDRPIY LDYQATTPVD PIVLEQMLPF LTHDFGNAAS RSHPYGWTAE KAVEKARQQV ADTIHADPRE IVWTSGATEA TNLALKGAAH FYSGKGRHLV TLRTEHKATL DTCRQLEREG FEVTYLEVQE DGLVDLQVFE AALRPDTIMA SVLYVNNEIG VIQPMEEIGR ILRAHKILFH VDAVQALGKI PVDVEAIQAD MMSLSGHKIY GPKGIGALYV RRKPRVRVEA QIHGGGHERG MRSGTLPTHQ IVGMGAAAEL AVQSMESDGK RIRQLRDRLL EGIRERVEET YINGNMEHRV PHNLNISFAF VEGESLIMAL KEIAVSSGSA CTSASLEPSY VLRALGKSDE LAHSSIRFGI GRYTTEEEID ATIGLIAAKV DKLRELSPLW EMHQEGIDIH SIQWAAH
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