Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0632 |
Symbol | cyoB |
ID | 7137240 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 563236 |
End bp | 565353 |
Gene Length | 2118 bp |
Protein Length | 705 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 643529038 |
Product | cytochrome o ubiquinol oxidase, subunit I |
Protein accession | YP_002425121 |
Protein GI | 218667210 |
COG category | [C] Energy production and conversion |
COG ID | [COG0843] Heme/copper-type cytochrome/quinol oxidases, subunit 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 0 |
Plasmid unclonability p-value | 0.714863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGGGGC GCCTTGCCTG GTCTCAGATT CCTTACGACA ACCCCATCCT GGCGCCGCTG TTTGTCGCGG TGGTCATTGG GGCCATCCTG GTGCTGGGTC TGATCACGTA CTACGGGAAA TGGACCTACC TGTGGAAGGA ATGGCTGACC ACCGTGGATC ACAAAAAACT AGGGGTGATG TACATCCTCA TCGGTTTGGT GATGCTGTTC CGGGGTTTCA TCGATGGTCT GATGATCCGG ACACAGCAGG CCTGGGCGGT AGGCCCACAT TCCTCGGGAG TGTTCGGTGC GACGCACGGT TACCTGACTC CGTTCCATTT CGGGCAGGTC TACAGTGCCC ATGGGGTGAT CATGATTCTG CTGGCAGCCA CGCCGTTGCT CGTCGGCTTC ATGAACATCA TCGTGCCCAT TCAGATCGGT GCCCGGGACA TGGCCTACCC CTACCTGAAT GCGTTGGGGC TATGGTTCAC CGCCGCGGCC GGGGCATTGA TCATGATTTC CCTGTTCGTG GGTGATTTCG CGCACAATGG CTGGTTCGGT TATGCACCGA TCTTCGAGTT GCAATACAGC CCGGGCGTCG GTGTGGACTA CTGGATATGG ACCATGGAGT TGTTGGCGCT GGGGACCACC TTGGGCGGCA TCAACATTCT GGCGACCATC ATCAAGATGC GCGCGCCGGG TATGACCTGG GGTCGTTTGC CGATCTTTGT CTGGGCTTCG ATTGCGTCGA ACGTGATTGC CCTGACTTCT TTTCCGGCAC TGCAGGTGGC ACTTGCATTG GTTGCTGCAG ACCGCTATCT GGGCGCGCAT TTCTTCACGG CGGGTCTGGG TGGCAATCTG ATGCTCTATA CCAATCTATT CTGGATATGG GGCCACCCGG AAGTCTATTT CGTGATTCTT CCGGCCTTCG GCATGATGTC GGAAATCTTT CCGACCTTTT CCGAAAAACC ATTATTTGGC TACATGACCA TGGTACTCGC CAGTATGGCC ATTGCCGGCG TTTCCTGGCT GGTCTGGCTG CATCATTTCT TTACCATGGG CGCCGGGCCC TACGTCAACA GCGCCTTCAG TGTGGCCACC ATGCTGGTCG GCATTCCTAC GGGTGTGAAG GTGTTCAACT GGGCATTCAC CATGTATCGT GGGCGTCTGA CTTTCAACGC CGCCATGCTG TGGGCCATCG GCGCGCTTTT CCTGCTGCTG GTCGGCGGAT TGACGGGCAT GATGCTGGCG GTTCCGGCCA TCAATTACAT GGTCCACAAC AGCGTTTTTG TGGTCGCGCA TTTCCATTCC ATGCTGTTGA CGATTGTGTA CGCCATTTTT GCTTCGGTGA TCTACTGGTT TCCCAAGGTC TTCGGCTTCA AGCTGAATGA GTTCTGGGCA AAGACCATGT TCTGGCTCTT TTCTGCCGGT ACGGTGCTGG TGTTCGTGCC GATGTACATG CTCGGTTTCA TGGGTATGAC CCGGCGTCTG GATTATGTGT TCAACACCGC TTGGCATCCT TATCTGCTGG TGATGGAATT CGGTATCGTG GTGTATACGC TTTCCGTCCT CGCATTTTTC GCGCTGCTTT ATGTCAGTGT CCGCGATCAT GCGAGCAACC AGGTTGGCGC GGATGCCTGG GGTACCTCCC GCTCGCTGGA ATGGCTTACC CATTCTCCTG TGCCATTTTA TAACTTTGCC GTACTGCCGC ACATCAATGC GCGCGATGAA GTGGCCTGGC GGCGTGATAA CGGCATCGAT CATGTTCAGC CCGATCACTA TGAAGATATC CATATGCCCA ATAATACCGG TGTGGCCATT GTCCTTGGCG GCCTGACCTT TGTGCTGGGT TTCGCCCTGG TATGGCGTAT CTGGTGGCTT TGTGCCTTCT CCCTGCTGGC AATCATTGCA CTCGTAATCT ACCGCTCCTT CAAGGGTGAT CCGGGTTACA TCATTACCGC GGCGGAACTG GAACAGATGG AAAAGGCAGC TATGCGCCGG GAAGCAGGGA TAGGTAAACA GCAGCATCGG GTCGGCGGCG GCGTATTGGG TGAGGCAATA GCCTATGAGC GTTCTGACCT GCCGCCACTG GCTTCGCAGC CGAGCTCATC CGTGGGGCTG GATCATCATC GCAGTTGA
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Protein sequence | MLGRLAWSQI PYDNPILAPL FVAVVIGAIL VLGLITYYGK WTYLWKEWLT TVDHKKLGVM YILIGLVMLF RGFIDGLMIR TQQAWAVGPH SSGVFGATHG YLTPFHFGQV YSAHGVIMIL LAATPLLVGF MNIIVPIQIG ARDMAYPYLN ALGLWFTAAA GALIMISLFV GDFAHNGWFG YAPIFELQYS PGVGVDYWIW TMELLALGTT LGGINILATI IKMRAPGMTW GRLPIFVWAS IASNVIALTS FPALQVALAL VAADRYLGAH FFTAGLGGNL MLYTNLFWIW GHPEVYFVIL PAFGMMSEIF PTFSEKPLFG YMTMVLASMA IAGVSWLVWL HHFFTMGAGP YVNSAFSVAT MLVGIPTGVK VFNWAFTMYR GRLTFNAAML WAIGALFLLL VGGLTGMMLA VPAINYMVHN SVFVVAHFHS MLLTIVYAIF ASVIYWFPKV FGFKLNEFWA KTMFWLFSAG TVLVFVPMYM LGFMGMTRRL DYVFNTAWHP YLLVMEFGIV VYTLSVLAFF ALLYVSVRDH ASNQVGADAW GTSRSLEWLT HSPVPFYNFA VLPHINARDE VAWRRDNGID HVQPDHYEDI HMPNNTGVAI VLGGLTFVLG FALVWRIWWL CAFSLLAIIA LVIYRSFKGD PGYIITAAEL EQMEKAAMRR EAGIGKQQHR VGGGVLGEAI AYERSDLPPL ASQPSSSVGL DHHRS
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