Gene AFE_0630 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0630 
Symbol 
ID7134717 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp560700 
End bp561452 
Gene Length753 bp 
Protein Length250 aa 
Translation table11 
GC content65% 
IMG OID643529036 
ProductDJ-1/PfpI family protein 
Protein accessionYP_002425119 
Protein GI218665643 
COG category[R] General function prediction only 
COG ID[COG0693] Putative intracellular protease/amidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTACCC GGCCTTCCGT CCTTATTCTG CTCAGCGCGG CGCAACGTCT TCGCCTCGAT 
GACGGCACCG AGGTTGCTAC CGGATTCTGG GCCGAAGAGC TGGTGACACC CTGGCAGATA
CTGCGCGAAG CAGGATGGCA AACGCACGTC GCCACTCCGG GCGGGGTGCG GCCGTCGGTC
GATGCCGAGA GTCTCGAGCC CGCCGCTCTT GGGGGCGATA CCCGCAAGGC CGCCCGGTTA
TGCGACGCCG TGGCGCAGAT CACGGACTTA ACCACACCTG CCGATTTGAA TGCGCTGACG
GGCGAGGACC TGGACGCCTT GGCCGGTGTT TTCATTCCCG GCGGCAATGG GCCGCTCATG
GACCTCTGCC GGGCACCGGC GATGGATCGC CTGCTGCGCT ACTGCCTAGC GACGGCAAAG
CCCGTCGCCA CCCTCTGCCA CGGCAGCGCA GCACTCCTCG CCACCTGCGG TGGGGCGGAC
CGTTCGCCTT TCCTGGGGCA ACGGGTAACC TGCTTCAGTG CGGCGGAAGA ATCGGCAACA
GCGCTGGCCG GGCGTTGGCC TTATACCCTC GAAGACCGGC TCCGGCAGGA AGGCTTCCTG
GTCAGCGTCG GCGTTCCGTG GCAAAGCCAT GTGGTCACGG ACCACCTCAT CCTCAGCGGC
CAGAATCCGG CCTCTGGGGC CGCACTTACC CATGCTTTCA TACAACGCCT CACCTCCACC
CCAACACATA AAGGAAAAGC ACATGAATAC TGA
 
Protein sequence
MTTRPSVLIL LSAAQRLRLD DGTEVATGFW AEELVTPWQI LREAGWQTHV ATPGGVRPSV 
DAESLEPAAL GGDTRKAARL CDAVAQITDL TTPADLNALT GEDLDALAGV FIPGGNGPLM
DLCRAPAMDR LLRYCLATAK PVATLCHGSA ALLATCGGAD RSPFLGQRVT CFSAAEESAT
ALAGRWPYTL EDRLRQEGFL VSVGVPWQSH VVTDHLILSG QNPASGAALT HAFIQRLTST
PTHKGKAHEY