| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0589 |
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| Symbol | |
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| ID | 7135620 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 521368 |
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| End bp | 523221 |
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| Gene Length | 1854 bp |
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| Protein Length | 617 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 643528995 |
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| Product | ATP-dependent RNA helicase, DEAD/DEAH box family |
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| Protein accession | YP_002425078 |
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| Protein GI | 218666755 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.159875 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAG AAACCGATCT CCGCTTTATT GATTTTGCCC TCGCTGAACC GATCCAAAAA
GCAGTTACGG AGATCGGCTA TGAACAGCCA TCCCCCATTC AGGCGCAGAG CATTCCGCCT
CTGCTCGAGG GGCGGGACGT TATCGGTCTG GCACAGACCG GCACGGGAAA GACTGCCGCC
TTTGCGCTGC CGTTGCTGAG TCGTGTCGAC CTCGGCTTGC GCGCGCCGCA GTTGCTGGTA
CTCGCGCCGA CTCGTGAACT CGCCATTCAG GTAGCGGAGG CCATGCAAAG TTATGCCAAG
TTCCTCCCCG GATTTCATGT GCTGCCCATC TATGGCGGGC AGGCCATGAC CTTGCAGCTC
AAGCAGTTGC AGCGGGGTGT GCAGGTCGTG GTGGGTACGC CCGGACGCAT TCAGGATCAC
CTGCGCCGCA AAACCTTGCG TCTGGATCAT TTGCAGGCCG TGGTGCTGGA TGAAGCCGAC
GAGATGCTGC GCATGGGCTT TATCGACGCA GTGGAGGATA TCCTCAAACA CACGCCCGAA
GGCCGACAGG TGGCGCTGTT TTCCGCGACC ATGCCGGACG CCATCCGCCG CATCGCCAAG
ACCTATTTAC GCAATCCCTT GGAAATCCGG ATTAAATCGG CGACGACTAC GGTGGCTGCC
ATTCGTCAGC GCTACTGGCA GGTCAGCGGT ACCCACAAGC TGGATGCCCT TACCCGTATT
TTGGAAGTAG AGGAGAGTAA CGCCTGGCTG GTTTTTGTGC GTACCAAAAC GGCGACAGTG
GAGCTGGCGG AGCGCCTGGA AGCGCGCGGC TATGCCTGTG GCGCGCTGAA CGGCGATCTC
AGTCAGGCCA TGCGCGAGCA GACCATTGAG CGATTGAAAG CCGGGACACT GGATATTGTC
GTTGCGACCG ATGTGGCGGC CCGCGGTTTG GATGTCGACC GGATCAGCCA TGTGATCAAC
TATGATATTC CTAATGATAC GGAAGCCTAT GTCCACCGTA TCGGGCGCAC GGGACGTGCC
GGACGTACCG GAGATGCGAT TCTTTTTGTC GCACCACGCG AACGTCACCT GCTGCACGCC
ATCGAGCGCG CGACGGGACA GACGATCACC GCGATGCACC TGCCCAGTAT CGAAGACGTC
GCCGACCGGC GGATGAGCCA GTTCAAGGAT CAGTTGACAG AGGTGCTGAA TAGCCAGGAT
CTGGCAGTCT TTGAAACCCT TATTGCGGAT TATCAGCGGG AAAGCGATGT GGGTTTGGGA
GAAATCGCTG CAGCGCTGGC ATACATGGTG CAGAAGGAAC GGCCCCTGAT TCCCGTTGAA
GCGGAGGTGT CCAGGCCGAT GCGTAGCGAT TCCGCCGGTT CGGGCGCTGG TCGCCCGCCT
TCCTCCCGTC GCCGCGCTGA CGACGAGCGG GGCGCACGGC CACCGCGGGC TGCTGCTGCA
TCGGGGGGAG GCGATGATGT GCCCATGCGT CGTTTCCGGC TGGATGTGGG CGAAAGCCAC
GGTGCGCAGG TCAAGAATAT TGTTGGTGCG ATCGCCAATG AGGCCGGGAT ACCCAGCCGC
AATATTCGCA AGGTACAGAT TAATGCAGAG CACACTACGG TCGAACTTCC TGCGGATATA
CAGCCATCAG TGCTGCAGCA TCTGCAAAAG GTGTGGGTAG CCGGACGGCC GTTGCAGATC
GCCCCGACGG ATGCCGGTGC GTCTGCAGGG CGGGCGTCAG CCCGGCCACG CCCGGCTATC
CATGAAGGGT CGCGGGTACC GCGCAAGATA CTTTCCGCCA GGACGGAAAA AGGTGAGTAT
AAAACCAAGG AGCGTGGCGC TGGGGCCACG AAGCGGAAGA AACCCGCGCG ATAG
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| Protein sequence | MSQETDLRFI DFALAEPIQK AVTEIGYEQP SPIQAQSIPP LLEGRDVIGL AQTGTGKTAA
FALPLLSRVD LGLRAPQLLV LAPTRELAIQ VAEAMQSYAK FLPGFHVLPI YGGQAMTLQL
KQLQRGVQVV VGTPGRIQDH LRRKTLRLDH LQAVVLDEAD EMLRMGFIDA VEDILKHTPE
GRQVALFSAT MPDAIRRIAK TYLRNPLEIR IKSATTTVAA IRQRYWQVSG THKLDALTRI
LEVEESNAWL VFVRTKTATV ELAERLEARG YACGALNGDL SQAMREQTIE RLKAGTLDIV
VATDVAARGL DVDRISHVIN YDIPNDTEAY VHRIGRTGRA GRTGDAILFV APRERHLLHA
IERATGQTIT AMHLPSIEDV ADRRMSQFKD QLTEVLNSQD LAVFETLIAD YQRESDVGLG
EIAAALAYMV QKERPLIPVE AEVSRPMRSD SAGSGAGRPP SSRRRADDER GARPPRAAAA
SGGGDDVPMR RFRLDVGESH GAQVKNIVGA IANEAGIPSR NIRKVQINAE HTTVELPADI
QPSVLQHLQK VWVAGRPLQI APTDAGASAG RASARPRPAI HEGSRVPRKI LSARTEKGEY
KTKERGAGAT KRKKPAR
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