Gene AFE_0519 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0519 
Symbol 
ID7135237 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp449303 
End bp450778 
Gene Length1476 bp 
Protein Length491 aa 
Translation table11 
GC content63% 
IMG OID643528926 
Producthypothetical protein 
Protein accessionYP_002425011 
Protein GI218666283 
COG category[S] Function unknown 
COG ID[COG0397] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATAAGG CATTATTACA TTTTGACAAT AGCTATGCGC GCGATCTGGA GGGCTTTTAC 
GCTCCCTGGC AGGCGGCCAC GGCACCAGCG CCCCGACTGC TGCTGTTGAA CCAGGCACTG
GCGGAGGAGC TGGGACTCGA CAGTGCCACG CTGGACGATG AACTGGGTGC CGCCATTTTT
TCCGGGAATC AGGTCCCGGA AGGCGCGCTG CCCTTGGCTC AGGCCTATGC CGGCCATCAG
TTCGGCCACT TCTCTCCGCA ACTGGGGGAC GGCCGCGCCC TCTTGCTCGG CGAGTTGATC
GATCGCCATG GTCGGCGCCG GGATATGCAA CTGAAAGGCT CTGGTCGCAC GCCCTTTTCC
CGGGGCGGCG ATGGCAAAGC GGCACTGGGG CCGGTGCTGC GCGAATATGT CATCGGCGAA
GCCATGCATG CGCTGGGCAT ACCCACGACG CGCGCGCTGG CCGCCGTCAC GACCGGGGAA
ACCGTCCGTC GGGAAACATG GCTCCCCGGC GCCATCCTCA CCCGCATCGC CGCCAGCCAT
ATTCGCGTCG GCACCTTTCA GTTCTTTGCC GCACGCAACG AAAACGTCCG GGTCAAACAA
CTGGCTGATT ACACCATCGC CCGCCACTAC CCCCCCCTGA AAGGTGCGGA CAATCCCTAT
CTGGAGCTGT TTGCGGCGGT ATCCGCCGCA CAGGCAGCCC TGATCGCGCG CTGGATGCTG
GTCGGTTTCA TTCACGGTGT GATGAACACG GACAACATGA GCATCGCCGG CGAGACCATC
GATTACGGCC CCTGCGCCTT CATGGATAAC TACGATCCGG AGACTGTTTT CAGCTCCATC
GACGCCCATG GCCGCTATGC CTACGCCCAC CAACCATTGA TTGCACAGTG GAATCTCACG
CGCTTCGCCG AAACCCTGAT TGATCTGGTT CACCCCGACC CCGATGAGGC CGCGCGCCTG
CTGACCGAAC AGCTCAACGA ATTTCCCAAG CTCTACACCC GCCACTGGCT CGATGGCATG
CGCGCCAAGA TGGGCCTGGC CACGGCGGAG GACGGCGATC TAGCGCTGGC GCAAGCCCTT
TTATCCGCCA TGGAAGGCCA GAATGCCGAC TTCACCCAGG TCTTCCGCGG TTTATCAGCG
GCAGTGCGCG GTGATCCGGC GCAGGTCCGC GCCCACTTTG TCAACCAGGC GCCGTTTGAT
CTTTGGTTGG CGCAATGGCA AGCCCGGCTG GCGCACGAAA GCGCCACCGC GGAGGCGCGC
GCCGAGGCTA TGGATCAGGT CAATCCGCTC TACATACCCC GCAACCACAA AGTCGAGGAA
GCCTTGGCCG CCGCTACGCT GAACCAGGAC CTCACCCCAT TCAAAGCGCT GCTCGCCGTG
CTGGAACGGC CCTTCGCGGA GCGTCCGGGG CTGGAGAGCT ATACCCAGCC TGCCCCCGAG
GATTTCGGGC CATTCAAAAC CTTTTGCGGG ACGTAG
 
Protein sequence
MDKALLHFDN SYARDLEGFY APWQAATAPA PRLLLLNQAL AEELGLDSAT LDDELGAAIF 
SGNQVPEGAL PLAQAYAGHQ FGHFSPQLGD GRALLLGELI DRHGRRRDMQ LKGSGRTPFS
RGGDGKAALG PVLREYVIGE AMHALGIPTT RALAAVTTGE TVRRETWLPG AILTRIAASH
IRVGTFQFFA ARNENVRVKQ LADYTIARHY PPLKGADNPY LELFAAVSAA QAALIARWML
VGFIHGVMNT DNMSIAGETI DYGPCAFMDN YDPETVFSSI DAHGRYAYAH QPLIAQWNLT
RFAETLIDLV HPDPDEAARL LTEQLNEFPK LYTRHWLDGM RAKMGLATAE DGDLALAQAL
LSAMEGQNAD FTQVFRGLSA AVRGDPAQVR AHFVNQAPFD LWLAQWQARL AHESATAEAR
AEAMDQVNPL YIPRNHKVEE ALAAATLNQD LTPFKALLAV LERPFAERPG LESYTQPAPE
DFGPFKTFCG T