| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0480 |
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| Symbol | lysS |
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| ID | 7134629 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 420457 |
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| End bp | 421947 |
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| Gene Length | 1491 bp |
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| Protein Length | 496 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 643528891 |
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| Product | lysyl-tRNA synthetase |
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| Protein accession | YP_002424976 |
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| Protein GI | 218665818 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG1190] Lysyl-tRNA synthetase (class II) |
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| TIGRFAM ID | [TIGR00499] lysyl-tRNA synthetase, eukaryotic and non-spirochete bacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTGGATC AGGAACTCAA TGACCAGATG CAGGTGCGGC GCGACAAGCT GGGACAGTGG
CGCAGCGAAG GCCATGCCTA TCCCAACGGC TTCCGCCGCG ATGCCCTGGC GGGCGACCTG
CAAGAGCGTT ATGGCGATAT GGACGCCACG GCGCTGGAGC AGGAGCCCAT CGAGGCACGG
CTCGGCGGGC GGCTGATGAG CCGCCGGGTC ATGGGCAAGG CCAGTTTCGC CGACATTCAG
GATCAGTCCG GGCGTATTCA ACTCTTTGTC AGCCGCGATA ATCTGGGCGA AGAGGTCTAC
GCGCGCTTCA AGGGCCTGGA TTTGGGCGAC ATCATCGGTG TGGATGGTAT CCTGTTCCGC
ACCAAGACCG GTGAATTGTC CCTGAAGGTG CATAGCCTCC AACTGCTGAG CAAGGCCCTG
CGTCCGCTGC CGGAAAAATG GCACGGGCTC GCCGACCCGG AAACCCGCTT CCGCCAGCGC
TATGTCGATC TGATCGTCAC CGAGGCCACC CGCCGCACCT TCCAGATTCG TGCGGAAACG
GTGGCGGCCC TGCGCGATGG TCTGCGCCAG CGCGGCTTTT ATGAAGCGGA GACGCCCATG
ATGCAGCCCG TCCCCGGTGG TGCCACGGCG CGGCCCTTTG TCACCCACCA CCATGCCCTC
GACATGACCC TTTACCTGCG TATCGCCCCG GAGCTGTACC TCAAGCGGTT GGTGGTGGGC
GGCATTGAGC AGGTCTTCGA GATCAACCGC AACTTCCGCA ATGAAGGTAT TTCCACCCGC
CACAATCCCG AGTTCACCAT GCTCGAATGG TACGAGGCCT ACGCCGACCA CGTGCGCGCC
ATGGACCTCA CCGAGACCCT GATCCGCGCC GCGGCACAGG CGGCCCTGGG CACCACGGCG
ATAAGCTATC AAGGGCTGGA GATCGACCTC GGCAAACCCT TCCACCGCCT GACGGTGACG
GAATCGGTGC GTGCCCATAA CCCCGATCTG GCGGATGCCG ATCTGCGGGA CCCCGCAGTG
CTGGCCGCCA AGCTCGCGCA GTTGCACCTG CCCTGTCAGC CCGCCTGGGG CTGGGGCAAA
CGTCTCATCG AAATCTTCGA GAAGACGGTG GAAGGCCATC TCCAGCAGCC CACCTTCATC
ACCGAGTATC CCCTGGAGGT CAGCCCGCTG GCGCGCCGCA ATGATCTCGA CCCCGAGGTC
ACGGATCGTT TCGAGCTGAT GATCGCCGGC CGCGAGTTGG CCAACGGCTT CTCCGAGTTG
AATGATCCCG AAGACCAGTC CGCCCGCTTC CGGGCGCAGG TCGAGGCTAA GGATGCCGGG
GACGAGGAGG CGATGTTCTT CGACGCCGAC TATATCCGTG CCCTGGAATA TGGCATGCCG
CCGACCGCAG GGGTGGGGCT GGGCATTGAC CGTCTGGTCA TGCTGCTTGC TGACCAGCCC
AGCATTCGCG AGGTGATTCT CTTCCCCCAT CTGCGGCCGG AACAGTCATG A
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| Protein sequence | MVDQELNDQM QVRRDKLGQW RSEGHAYPNG FRRDALAGDL QERYGDMDAT ALEQEPIEAR
LGGRLMSRRV MGKASFADIQ DQSGRIQLFV SRDNLGEEVY ARFKGLDLGD IIGVDGILFR
TKTGELSLKV HSLQLLSKAL RPLPEKWHGL ADPETRFRQR YVDLIVTEAT RRTFQIRAET
VAALRDGLRQ RGFYEAETPM MQPVPGGATA RPFVTHHHAL DMTLYLRIAP ELYLKRLVVG
GIEQVFEINR NFRNEGISTR HNPEFTMLEW YEAYADHVRA MDLTETLIRA AAQAALGTTA
ISYQGLEIDL GKPFHRLTVT ESVRAHNPDL ADADLRDPAV LAAKLAQLHL PCQPAWGWGK
RLIEIFEKTV EGHLQQPTFI TEYPLEVSPL ARRNDLDPEV TDRFELMIAG RELANGFSEL
NDPEDQSARF RAQVEAKDAG DEEAMFFDAD YIRALEYGMP PTAGVGLGID RLVMLLADQP
SIREVILFPH LRPEQS
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