Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0295 |
Symbol | glyA |
ID | 7136603 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 265259 |
End bp | 266503 |
Gene Length | 1245 bp |
Protein Length | 414 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 643528707 |
Product | serine hydroxymethyltransferase |
Protein accession | YP_002424802 |
Protein GI | 218666113 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0112] Glycine/serine hydroxymethyltransferase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGTTTTCCA AAACCCTGAC CATCGCTGAT TTTGACCCCG TGCTTTGGGA TGCCATGCGC AAAGAGGCCC GGCGCCAGGA GGATCATGTC GAGCTCATCG CTTCCGAGAA CTATGCCAGC CCCATGGTAA TGGCGGCGCA GGGCTCGGTG CTGACCAACA AATACGCAGA AGGCTATCCT GGTAAACGCT ACTATGGCGG CTGCGAGTAC GTAGATATCG CCGAGCAGCT CGCCATGGAC CGTGCGCTGG AGCTTTTCGG CGCTGAACAT GCCAATGTCC AGGCTCATTC CGGCTCGCAG GCCAATCAGG CTGTTTACTT GTCCGTGCTC CAGCCCGGTG ACAAGATCAT GGGCATGAGT CTTGCCCATG GCGGCCACCT GACCCATGGC GCCAAAGTGA ACGTGTCCGG CAAGCTTTTT CAGGTGGCGG CTTACGGCGT GCGCGCGGAA GACGGCCGCA TCGATTATGA CGCCATGGCG GAGCAGGCGG AGCGGGAACG CCCGAAGATG ATCGTTGCCG GTGCCAGTGC CTACTCTCGC GTCATCGACT TCGCCCGCAT CGGCGAGATT GCCCGCAGCA TCGGCGCCTA TCTGCTGGTG GACATGGCGC ACATCGCCGG CCTTGTGGCC ACGGGCCTGC ATCCCAGCCC CGTGCCCCAT GCGGATTTTG TCACCACCAC CACCCACAAG ACCCTGCGCG GTCCTCGCGG CGGATTGATC CTCTGTCGGG AGCAATATGC CAAAAAGGTG AACTCCCTGA TCTTCCCCGG CTTACAGGGG GGGCCGCTGA TGCATGTCAT CGCTGCCAAG GCCGTCGCCT TCCGTGAAGC GCTGCAGCCG GAGTTCAAGT CCTATCAGCA GCAGGTCATT CATAACGCGC AAACCTTGAG CAAGGTGTTG GCCGGGCGTG GTTATGGCGC GGTTTCGGGT GGCACCGACA ACCATCTCTT CTTGCTGAAC CTGGGCGAAA AAGTCACGGG TAAGGAGGCG GAAGAGGCAC TGGGACAGGC CAATATCACC GTCAACAAGA ATGCCGTGCC CTTCGATATC CGCCCCCCGG CGGTTACCAG CGGCATCCGG ATTGGTACGC CGGCCGCTAC CACGCGTGGC TTTGGCGAGG CCGAAATGCA TCGCCTGGGC AACGGCATTG CTGATGTCCT GGATGCGAGC AGCGATGCTG CGGTCATTGA GCGGGTCCGT GCAGATATGA AGGCCCTCTG CCATCAGTTT CCGGTATACG GCTGA
|
Protein sequence | MFSKTLTIAD FDPVLWDAMR KEARRQEDHV ELIASENYAS PMVMAAQGSV LTNKYAEGYP GKRYYGGCEY VDIAEQLAMD RALELFGAEH ANVQAHSGSQ ANQAVYLSVL QPGDKIMGMS LAHGGHLTHG AKVNVSGKLF QVAAYGVRAE DGRIDYDAMA EQAERERPKM IVAGASAYSR VIDFARIGEI ARSIGAYLLV DMAHIAGLVA TGLHPSPVPH ADFVTTTTHK TLRGPRGGLI LCREQYAKKV NSLIFPGLQG GPLMHVIAAK AVAFREALQP EFKSYQQQVI HNAQTLSKVL AGRGYGAVSG GTDNHLFLLN LGEKVTGKEA EEALGQANIT VNKNAVPFDI RPPAVTSGIR IGTPAATTRG FGEAEMHRLG NGIADVLDAS SDAAVIERVR ADMKALCHQF PVYG
|
| |