Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0237 |
Symbol | kdtA |
ID | 7135971 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | + |
Start bp | 213883 |
End bp | 215136 |
Gene Length | 1254 bp |
Protein Length | 417 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643528649 |
Product | 3-deoxy-D-manno-octulosonic-acid transferase |
Protein accession | YP_002424744 |
Protein GI | 218665332 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG1519] 3-deoxy-D-manno-octulosonic-acid transferase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAGTC GCCGCCTCTA CGCCTTTCTG CTCTGGCTGC TCAGCCCTGT CGTCCTGGGT TTTACCCTCT GGCGAGCCTG GCGCCGGCCT GCCTACCGGG AGCGCTGGTG GGAGCGTTTC GGCTGGGGGC CGCGCCGTTC GGATCGGCCT ATCTGGATTC ATGCGGTGAG TGTGGGGGAG ACCATCGCGG CGATCCCCCT GGTGCGGGCG TTGCAGGGAC GTTATCCGGA GCTGCCCATT CTGATGACCA GCACAACGCC GACGGGTGCT GCTGTAGTCC GTCAGCGTTT GGGTACGGAG GTGCTGCAGC ATTACCTGCC TTATGACCTG TCCGCGGCGG TCACACGCTT TTTGCGCCGC CAGCGGCCGC GCCTGGGGAT TATCATGGAA ACGGAGATCT GGCCCAATCT CTGTCATGCG GCCCGCCGCC AGGGCGTGCC CCTGATGCTG GCCAATGCCC GGCTCTCGCA GCGCTCACTT CGGGGTTATG CCCGTTTCCG GATGCTCTTT ACCCCCGCAT TGGCCAGCAT GAGCGCTGTT GCGGCCCAGA GTTCGGAGGA TGCGGCGGCT TTTCGCCGCC TGGGCGCAGA GCATGTGGTG GTGACCGGTA ATATCAAATA TGACCTGCCC GAACCCGTCG CCGCGCGGGA GCGGGGGGGG CAGTGGCGGC AGCGCTTCGC TGGGCGACCG GTCTGGGTAT TCGCTTCTAC GCATGCCGGT GAGGAGCAGA TGGCGCTGGC GGCGCTGGAA GACTTGCAGC GCCAATGGCC GGATCTGCTG CTGGTGCTGA TTCCGCGTCA TCCCTCGCGG CGACTGGAGG TGATGGCACG GATGCAGGCA AAGGGGGTGT CCTTTGCCTT GCGCTCACGT GCCGAGGATG TGGGGGGGCA TGCGGTTTTT CTGATAGATA CACTGGGTGA GGTGATGGAC TTCTACGCGG CGGCAGATGT GGTGACCATC GGTGGCAGTT TTGTGCCGGC GGGGGGGCAT AATCCCCTGG AAGCTGCGGC ACTGGCCCGG CCGGTTACCT TCGGCCCGCA TATGGATAAT TTTAAGGGCA TCACCCAGGA TTTGCTGGCG GCCAACGCCG CGGTTCAGGT GGTGGATGTC GAGGCCCTGG TAGCGCAGTT GGCTGCGTGG TTGACTACCC AGGGGCCAGC GACGGAGATG GGCGACCGTG CCCTGGCGTT TCTGCAGCAG CAGCGTGGTG CGCTGAGGCG TACTTTGTCC CTGCTGGATC ATCTCGTTCC GTAA
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Protein sequence | MMSRRLYAFL LWLLSPVVLG FTLWRAWRRP AYRERWWERF GWGPRRSDRP IWIHAVSVGE TIAAIPLVRA LQGRYPELPI LMTSTTPTGA AVVRQRLGTE VLQHYLPYDL SAAVTRFLRR QRPRLGIIME TEIWPNLCHA ARRQGVPLML ANARLSQRSL RGYARFRMLF TPALASMSAV AAQSSEDAAA FRRLGAEHVV VTGNIKYDLP EPVAARERGG QWRQRFAGRP VWVFASTHAG EEQMALAALE DLQRQWPDLL LVLIPRHPSR RLEVMARMQA KGVSFALRSR AEDVGGHAVF LIDTLGEVMD FYAAADVVTI GGSFVPAGGH NPLEAAALAR PVTFGPHMDN FKGITQDLLA ANAAVQVVDV EALVAQLAAW LTTQGPATEM GDRALAFLQQ QRGALRRTLS LLDHLVP
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