Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0220 |
Symbol | |
ID | 7134710 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 195622 |
End bp | 197364 |
Gene Length | 1743 bp |
Protein Length | 580 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643528632 |
Product | AMP-binding protein |
Protein accession | YP_002424727 |
Protein GI | 218666535 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCATCG ATCTCGGCCA TTTCCAGAGC CTGCCCGAGG GCCTCTTCGC ACGCTGTGCC CGCGCTCCCG GCGGGACCAT CGCCCTGCAA CGACAGGACG ACGTTTTTCA GCCGATGACC GCAGCAGCCT TCGCCGGACA GGTACGGGCG CGGGCGCGGG GACTTCTGCA CCTGGGGGTG CGCCGGGGCG AGCGGGTCAT TCTGATGGCG CCCAACTCCG TGGACTGGGC TATCATGGAT TTTGCCATCC TCAACGTTGG CGCCATTACC GTCCCTCTCT ACCCGACATT CAGCCCGCGC GAGATTCACT TTGTACTGGG TGACAGCGGC GCCGGGTTGA TACTGCTGGA AGGCGCTGCG GAATGGCAAC GACTGGGGGG CGAGGGGGGC TGGGGCGTGG CCGACGACCG TATCCTGCTG CGCGACGCGG CGGCCGCGCA GAACGCCGGC CTGCGCCATT GGGCATCACT GAAGAACGAG GCAGCAACGG TACCGGATAG CGGGCTGGAA GAACGTCTGG CGGGCTTGCA GCGCCAGCAA ACCGCAACCA TCGTCTACAC TTCCGGGACG ACGGGTTGGC CCAAGGGCGT CATGCTCAGT CACGGCAACA TCCTCAGCAA CATCGAAGGC TTTCTGCCAC TGGTACCGTT GCATGCTGGA CAACGCCTGC TTTCCATACT GCCTCTGTCC CATGTCTTTG AACGCGGTAC CGGGCATTTC GGCGCCTACC TGCTGGGCCT GGAAGTGGCC TACGCGGAGC GCCCGGACAC CGTCCTCCGC GACATGGCAA CGTCGCATCC GAACATAGTG GTCGCCGTGC CGCGCGTTTT TCAACTACTC TATGGTCGGG TACGACGAGG TATCGAAGAC CGACCGGGCC TGCTCGGGCG TTTTCTGCGC CGGGGGGCAG GGCTCGATCC GCACGGGCGT CCGGCGGCGC GCTGGCAACG TTCCCTTACC CGCCGCCTGC TGATCCGCAG TCTCCGCAAG AAACTGGGCG GGCGCCTGCG TTTCTTCGTC TCCGGCGGCG CGCCGCTGGA CGCCGGGATC ACCCGCTTCT TCGTTGACCT GGGATTGCCC ATTGTGGAAG GGTACGGTAT GACTGAAGCG AGTCCGGTGA TCGCCGCCAA TCCACTGGAA GCCATTCATC CGGGAACCGT GGGGCGGTTT CTGCCCAATC TCGAGGGGCG CCTGGCCGCA GATGGCGAAA TCCTGGTGCG CGGCCCGTCC GTCATGCTGG GCTACTGGAA TAACGAGAGT GCGACGGGCG AGGCACTGGT AGACGGCTGG TTGCACACCG GCGATGTGGG CAGTCTGGAC CCGGACGGTT ACCTGCGAAT CAGCGACCGC AAGAAAGACC TGATCGTCAA CTCCGCCGGC GAGAATATCC CGCCGCAAAA AATCGAGATG CGGCTGATGG CACAAGCGCT GATCGAACAG GCCGTCGTCT TCGGTGACCG AATGCCCTAT CTCGTGGCGC TCATCTTTCC CAATCAGGAA GTCCTCAAAG CGCGTGCCGT TGACCACGCG GACGAAGCCG CCACCCGCAA GGCCGTCCAG AAGGCCATTG CGACCGCCCT CGCCGACCTG CCCTCCCATG AACAGGTGAA GCGTTTCGCT CTGCTGCCGG AAGCACTGAG TGAAACCAAT GGCGAACTGA CACCCACCCT CAAAGTGAAA CGGCGCGTCG TCGCCGAACA TTACGCTGCT CTGCTGACGC AAATGGGCAG CGGCAAGAGC TGA
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Protein sequence | MTIDLGHFQS LPEGLFARCA RAPGGTIALQ RQDDVFQPMT AAAFAGQVRA RARGLLHLGV RRGERVILMA PNSVDWAIMD FAILNVGAIT VPLYPTFSPR EIHFVLGDSG AGLILLEGAA EWQRLGGEGG WGVADDRILL RDAAAAQNAG LRHWASLKNE AATVPDSGLE ERLAGLQRQQ TATIVYTSGT TGWPKGVMLS HGNILSNIEG FLPLVPLHAG QRLLSILPLS HVFERGTGHF GAYLLGLEVA YAERPDTVLR DMATSHPNIV VAVPRVFQLL YGRVRRGIED RPGLLGRFLR RGAGLDPHGR PAARWQRSLT RRLLIRSLRK KLGGRLRFFV SGGAPLDAGI TRFFVDLGLP IVEGYGMTEA SPVIAANPLE AIHPGTVGRF LPNLEGRLAA DGEILVRGPS VMLGYWNNES ATGEALVDGW LHTGDVGSLD PDGYLRISDR KKDLIVNSAG ENIPPQKIEM RLMAQALIEQ AVVFGDRMPY LVALIFPNQE VLKARAVDHA DEAATRKAVQ KAIATALADL PSHEQVKRFA LLPEALSETN GELTPTLKVK RRVVAEHYAA LLTQMGSGKS
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