| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0208 |
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| Symbol | murD |
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| ID | 7135526 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | - |
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| Start bp | 184551 |
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| End bp | 185897 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 643528622 |
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| Product | UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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| Protein accession | YP_002424717 |
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| Protein GI | 218666253 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0771] UDP-N-acetylmuramoylalanine-D-glutamate ligase |
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| TIGRFAM ID | [TIGR01087] UDP-N-acetylmuramoylalanine--D-glutamate ligase |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGACATGA ACGGGAAAAA GGCATACATC CTCGGCATGG GCAAGACGGG ACACTCCCTC
TTGCGTACGG CCCTGCGCCT GGGCGCTCAT TGCCGAGTGG CCGACACGCG TCTGCTACAA
GACGCCGCCG ACTTGCGGCG CCGTTATCCA GCAGTCGATT TTCATTTTGG TGACATGCCC
GAGGACCTGT TTCTGGAGGC GGATATTCTT CTGCTCAGCC CGGGGCTGGC GCCGTCGCTG
CCCGCTCTCG TCAGCGCCAG ACGGGCCGGC ATCGAAATTC TGGGCGATAT CGAACTTTTT
GGCCGGATCA CCCGGGCGCC CATCGTCGCG ATCACCGGCA GCAATGGTAA AAGCACCGTC
ACCACCCTGG TGGGCGAAAT GGCACGGGCC GCGGGGCTGC GCGCCGCCGT CGGCGGCAAC
CTCGGCACTC CCGCCCTCGA CCTTCTGCCC GAAACAGGGC CCGAGCCCGA TCTCTATGTC
CTCGAGCTTT CCAGCTTCCA GCTTGCGGCC TGTCATGATT TCCACCCTCG CGCCGCCGCC
ATTCTCAACC TGAGCCCGGA TCATCTGGAC TGGCATGGTG ACTATGCGGC CTATGCTGCC
GCGAAAACCC GCATTTTCCG GGCGATGGGC GCAGGGGACA CGCTGGTACT GAACGCCGGA
GACACCTTTA CGGCCGCCCT ACCGCCCCAG GTCCCTGCGG GCGTGCGGGT GCAGTTCTTT
GGCGGCGCTG ACGAACACGA CGCCAGCATC GCCGGGGACC GGCTCTGCCT GCGTAGCGAT
GGTCCCCTGC TGGATTTGGA TCAACTCCCG CTGCGCGGCG CGCATAACGC CGAAAATGCG
CTGGCCGCCG CCCTGCTGGC CCGCGCGATG GCCGTCCCTG TGACGGCCAT CCGCCAGGCG
TTGCGTACTT TCCCGGGTCT ACCCCACCGC CTTGCCCGGA TCGCCGAGAT CAACGGAGTG
AGTTACTACG ACGATTCCAA GGGCACCAAC CTGGGCGCGA CCCTCAAAGC CATGTCCGGC
TTGCCGGGAC CCCTGGTGAT GATACTCGGT GGCGATGCCA AGGGGGCCGA CCTGAGCCCC
CTGCGGGAGG CCTGTCGCGG GCAGCGTGGC GTTGTCGTCC TCGGTAAGGA CGGGCCACAA
ATCTCCGCCC TGCTCGCCGG AATACTGCCC GTCGAGAGTG CCCGGAACAT GGCTCAGGCT
GTCGAGAAGG CGGCGGTGCT GGCGCAGCGT GGCGATCAGG TGCTGCTCTC GCCCGCCTGC
GCCAGTACCG ATATGTTTAC CGATTATCAG GATCGCGGCC GTCAATTCGC CGTGGCGGTA
CGGGCCCTGA CGGAGGATCT GGCATGA
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| Protein sequence | MDMNGKKAYI LGMGKTGHSL LRTALRLGAH CRVADTRLLQ DAADLRRRYP AVDFHFGDMP
EDLFLEADIL LLSPGLAPSL PALVSARRAG IEILGDIELF GRITRAPIVA ITGSNGKSTV
TTLVGEMARA AGLRAAVGGN LGTPALDLLP ETGPEPDLYV LELSSFQLAA CHDFHPRAAA
ILNLSPDHLD WHGDYAAYAA AKTRIFRAMG AGDTLVLNAG DTFTAALPPQ VPAGVRVQFF
GGADEHDASI AGDRLCLRSD GPLLDLDQLP LRGAHNAENA LAAALLARAM AVPVTAIRQA
LRTFPGLPHR LARIAEINGV SYYDDSKGTN LGATLKAMSG LPGPLVMILG GDAKGADLSP
LREACRGQRG VVVLGKDGPQ ISALLAGILP VESARNMAQA VEKAAVLAQR GDQVLLSPAC
ASTDMFTDYQ DRGRQFAVAV RALTEDLA
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