| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | AFE_0185 |
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| Symbol | |
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| ID | 7136186 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_011761 |
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| Strand | + |
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| Start bp | 163903 |
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| End bp | 165240 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 643528599 |
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| Product | type IV fimbriae expression regulatory protein PilR, putative |
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| Protein accession | YP_002424694 |
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| Protein GI | 218667563 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.103259 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGCCGCCCG CCCTGATCGT AGATGACGAG CCGGGCATCG TCGAACTGCT GGGCATTACG
CTGCAGGGTA TGGGGATCGC TGTCACGGGC GCATATTCCC TTGCAGAAGC CCGCGCCCGC
CTCGCCGAAG GCGCCCCTTC TTTATGTCTG AGCGATCTGC GTTTGCCCGA CGGTTCCGGT
CTTGATCTGG TCCGCCGTTT GCGCGAGTTG TATCCACAAG TGCCGGTCGC CGTGATTACG
GCCTATTCTT CCGCCGATGG TGCCGTCGAA GCGATGCAGG CAGGGGCCTT CGATTACATG
GCCAAGCCCA TCGAACTGGC GCGTCTGCGG CGATTGATAT CCCAGGCCGT TGATCTCAGC
CGCCTGTCCC CGGCGGGCCT GGGCGGCACG CAACGACTGG TCGGCGATGC TCCGGTCATG
CAGCGGTTGC GCGACGATAT CCGCCGAGTA GCGCGGAGTA ACGCGCCGGT ACACATCACC
GGTAAGTCCG GTACGGGCAA GGAACTGGCC GCACGCGCCA TTCACGCCTC GGGACCCCGT
CACGACAAGC CCTTCGTGGC CGTCAACTGC GGCGCCATTC CCGAGGGATT GGTGGAGAGT
GAACTGTTCG GTGCCGAAAA GGGGGCTTAT TCCGGTGCCG TACAGCGTCG CGAAGGACTC
TTTGCGGCGG CCAACGGGGG CACTATTTTT CTGGATGAGA TCGGCGATCT GCCGATGATG
ATGCAGGTCA AGCTGCTGCG GGCCATTCAG GAACGGGCCA TTCGCCCCCT GGGCGCGGCG
CGGGAAATCT CCCTGGACCT GCGCTTCATT TCCGCCACCC ACCGTGACCT GCAGGAAATG
GTTGCGGCCG GAAAGTTTCG TCAGGATCTC CGGTATCGTC TGGATGTGGT AAGACTCCAT
ATGCCGGCCC TGCGGGAACA TCCGGAAGAC ATCCCGCAAC TGGCAGAGGT GATTCTGCAA
CGTATCGGCG TGGCACCGCA GGATATTCCA GCGCTGCTGT CCCCAGGCAC TTTGGAGCGG
CTGGGTAGTT ACGCCTTCCC CGGCAACGTT CGCGAGTTGG AAAACTTTCT GGAGCGGAGC
CTTGCCCTCA AGCAGGAAGG GATGCTGCTC GACGAAGGGA TGTCCTCCCC CGCCGGCCCG
GTGTCAAAAA GCAACGGGCC GGCGTTGGCA CCGGTAATCG CCGTACCGGC CGCTTTTGAC
GCGGCGGAGG CCGCATTGCT GCGGCAGGTG CTCGATCAGG CCGAAGGGGA TCGGCGTCAT
GCCGCCGTTC TGCTGGGGAT CAGTCTGCAG TCGCTGGATC TGCGGCTGCA CCGATTATTC
CCGGAGGGTG ACGCATGA
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| Protein sequence | MPPALIVDDE PGIVELLGIT LQGMGIAVTG AYSLAEARAR LAEGAPSLCL SDLRLPDGSG
LDLVRRLREL YPQVPVAVIT AYSSADGAVE AMQAGAFDYM AKPIELARLR RLISQAVDLS
RLSPAGLGGT QRLVGDAPVM QRLRDDIRRV ARSNAPVHIT GKSGTGKELA ARAIHASGPR
HDKPFVAVNC GAIPEGLVES ELFGAEKGAY SGAVQRREGL FAAANGGTIF LDEIGDLPMM
MQVKLLRAIQ ERAIRPLGAA REISLDLRFI SATHRDLQEM VAAGKFRQDL RYRLDVVRLH
MPALREHPED IPQLAEVILQ RIGVAPQDIP ALLSPGTLER LGSYAFPGNV RELENFLERS
LALKQEGMLL DEGMSSPAGP VSKSNGPALA PVIAVPAAFD AAEAALLRQV LDQAEGDRRH
AAVLLGISLQ SLDLRLHRLF PEGDA
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