Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0174 |
Symbol | xth-2 |
ID | 7136116 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 153399 |
End bp | 154160 |
Gene Length | 762 bp |
Protein Length | 253 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 643528588 |
Product | exodeoxyribonuclease III |
Protein accession | YP_002424683 |
Protein GI | 218665721 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0708] Exonuclease III |
TIGRFAM ID | [TIGR00195] exodeoxyribonuclease III [TIGR00633] exodeoxyribonuclease III (xth) |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.100757 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCGCCTGT ATAGCTGGAA CGTGAACGGC TGGCGCGCCG CCTGTCGCAA AGGGTTGCGC GAATGGGTCG CGACGGTGCA GGCGGATGCG CTCTGCTTCC AGGAAATCAA GGCCGACCCG GACCGCCTGC CGGCGACGGA AACCGCACTG GATGGTTACG ATGCCCGCTG GGCGGTCGCT GAACGCCCGG GTTACAGCGG CGTCGCCACC TTCAGCAGAG CGCCCTGCCG GCCGCTGACA ACGGGCCTGG GCATCCCGCG CTTCGACCGG GAGGGGCGCG TGGTCGTCAC CGACTGCGGT GATTTCGACC TGTATAACGT CTACTTTCCC AACGGCAAGA AGGATACGGA ACGCCTCGCC TTCAAGCTGG ATTTCTATGC CGCCTTCCTG GAACTGATCA ACGCGCGGGT CGCCGCCGGC CGGGCGGTGG TATTCTGTGG CGACGTCAAC ACCGCCCATC AGGCCATCGA CCTTGCACGC CCCAAAGAAA ACGCGAGAAT ATCCGGTTTT CTCCCCGAGG AAAGGGCCTG TCTGGACCAA TGGGCAGCGG CGGGCTGGGT GGACAGCTTC CGCCACCTTC ACCCGGATGC CGTGGAGTAT TCCTGGTGGA GTCAGCGCAC CGACGCCCGC GCCCGCAATA TTGGCTGGCG CCTCGATTAT TTCTGGATAC ATGAGAGCCT GTTGCCGCGC CTGCGCGGAG CGGGGATCGC CACCGATGTG ACCGGCTCCG ATCATTGCCC GGTCTGGCTG GAGTTGGATT GA
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Protein sequence | MRLYSWNVNG WRAACRKGLR EWVATVQADA LCFQEIKADP DRLPATETAL DGYDARWAVA ERPGYSGVAT FSRAPCRPLT TGLGIPRFDR EGRVVVTDCG DFDLYNVYFP NGKKDTERLA FKLDFYAAFL ELINARVAAG RAVVFCGDVN TAHQAIDLAR PKENARISGF LPEERACLDQ WAAAGWVDSF RHLHPDAVEY SWWSQRTDAR ARNIGWRLDY FWIHESLLPR LRGAGIATDV TGSDHCPVWL ELD
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