Gene AFE_0174 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagAFE_0174 
Symbolxth-2 
ID7136116 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameAcidithiobacillus ferrooxidans ATCC 23270 
KingdomBacteria 
Replicon accessionNC_011761 
Strand
Start bp153399 
End bp154160 
Gene Length762 bp 
Protein Length253 aa 
Translation table11 
GC content64% 
IMG OID643528588 
Productexodeoxyribonuclease III 
Protein accessionYP_002424683 
Protein GI218665721 
COG category[L] Replication, recombination and repair 
COG ID[COG0708] Exonuclease III 
TIGRFAM ID[TIGR00195] exodeoxyribonuclease III
[TIGR00633] exodeoxyribonuclease III (xth) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.100757 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCGCCTGT ATAGCTGGAA CGTGAACGGC TGGCGCGCCG CCTGTCGCAA AGGGTTGCGC 
GAATGGGTCG CGACGGTGCA GGCGGATGCG CTCTGCTTCC AGGAAATCAA GGCCGACCCG
GACCGCCTGC CGGCGACGGA AACCGCACTG GATGGTTACG ATGCCCGCTG GGCGGTCGCT
GAACGCCCGG GTTACAGCGG CGTCGCCACC TTCAGCAGAG CGCCCTGCCG GCCGCTGACA
ACGGGCCTGG GCATCCCGCG CTTCGACCGG GAGGGGCGCG TGGTCGTCAC CGACTGCGGT
GATTTCGACC TGTATAACGT CTACTTTCCC AACGGCAAGA AGGATACGGA ACGCCTCGCC
TTCAAGCTGG ATTTCTATGC CGCCTTCCTG GAACTGATCA ACGCGCGGGT CGCCGCCGGC
CGGGCGGTGG TATTCTGTGG CGACGTCAAC ACCGCCCATC AGGCCATCGA CCTTGCACGC
CCCAAAGAAA ACGCGAGAAT ATCCGGTTTT CTCCCCGAGG AAAGGGCCTG TCTGGACCAA
TGGGCAGCGG CGGGCTGGGT GGACAGCTTC CGCCACCTTC ACCCGGATGC CGTGGAGTAT
TCCTGGTGGA GTCAGCGCAC CGACGCCCGC GCCCGCAATA TTGGCTGGCG CCTCGATTAT
TTCTGGATAC ATGAGAGCCT GTTGCCGCGC CTGCGCGGAG CGGGGATCGC CACCGATGTG
ACCGGCTCCG ATCATTGCCC GGTCTGGCTG GAGTTGGATT GA
 
Protein sequence
MRLYSWNVNG WRAACRKGLR EWVATVQADA LCFQEIKADP DRLPATETAL DGYDARWAVA 
ERPGYSGVAT FSRAPCRPLT TGLGIPRFDR EGRVVVTDCG DFDLYNVYFP NGKKDTERLA
FKLDFYAAFL ELINARVAAG RAVVFCGDVN TAHQAIDLAR PKENARISGF LPEERACLDQ
WAAAGWVDSF RHLHPDAVEY SWWSQRTDAR ARNIGWRLDY FWIHESLLPR LRGAGIATDV
TGSDHCPVWL ELD