Gene AFE_0165 details

Gene Information

• Locus tag: AFE_0165
• Symbol: pdxA
• ID: 7134988
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Acidithiobacillus ferrooxidans ATCC 23270
• Kingdom: Bacteria
• Replicon accession: NC_011761
• Strand: +
• Start bp: 144324
• End bp: 145325
• Gene Length: 1002 bp
• Protein Length: 333 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 643528579
• Product: 4-hydroxythreonine-4-phosphate dehydrogenase
• Protein accession: YP_002424674
• Protein GI: 218667827
• COG category: [H] Coenzyme transport and metabolism
• COG ID: [COG1995] Pyridoxal phosphate biosynthesis protein
• TIGRFAM ID: [TIGR00557] 4-hydroxythreonine-4-phosphate dehydrogenase

Plasmid Coverage information

• Num covering plasmid clones: 14
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGATCACGG AGCCACGTTT GCTGCTGACC GTGGGGGAAC CCGCGGGTAT TGGTCCGGAT 
ATCTGTTTGC AACTGGCCTT CCATGCCCTG CCCTCGGGGG TGCTGCTCAT CGGGGATCTG 
CACTGTCTGC GCAGCCGCGC CCTGACTTTG GGCTTGTCGC TGCGACTGGA GCCCTGGCTG 
GAAGGCAATC CCTGGCCGGC GCTGGAAAGG GGCGTGTTGC ATGTGCTGGA TGTGCCCCTG 
GCTCAGCCTT GTCGGCCCGG TCGTCTGGAT ATGGCCAATG CGCCGGCGGT ACTGGCTACT 
CTGGATAAGG CGATGCATCT GCTACGGGCA GGTGCCGCGG ATGCGCTGGT GACGGCCCCG 
GTGCACAAGG GCATCATCAA CGACGCGGGG ATTCCCTTTA CCGGACATAC GGAATATCTC 
GCGGCAGCGT GTGGCAGCCC GAAGGTGGTC ATGCTGCTCG CCGGTCGCGG CTTGCGGGTG 
GCACTGGCAA CGACGCATCT GCCGTTGGCG CAAGTGGCGG CGGCCGTTAC CCAGGAGGGG 
CTGGAGGGCA CGCTGCGCAT TCTGCACCGG GCGTTGCGCG AAGACTTCGC GCTCTCGGAA 
CCCCGTATTC TGGTCGCCGG CCTGAATCCC CATGCCGGGG AGGGCGGGCA TCTGGGGCAC 
GAGGAGCAGG ATGTCATTGC GCCGGTAATA GCGGCCCTGC AGGGAGAAAG TCTGCGGATC 
AGCGGTCCGT GGCCGGCCGA TACGCTGTTT ACCCCGCGCC TGCTCGAAGA TGCCGATGCG 
GTACTGGCCA TGTATCATGA TCAGGGCCTG CCGGTACTGA AGTACCATGC CTTCGGTGAG 
GCGGTGAATA TTACTCTGGG CTTGCCCATC GTGCGCACCA GTGTGGACCA CGGCACGGCG 
CTGGACATCG CGGGCACAGG CCGGGCAGAA GGCGGCAGCC TGCTCCGGGC CCTGGACAAT 
GCTGCGGAAA TCGTTCGCAA CCGGCGCGCC GCCGGTTGCT GA 

 

Protein sequence

MITEPRLLLT VGEPAGIGPD ICLQLAFHAL PSGVLLIGDL HCLRSRALTL GLSLRLEPWL 
EGNPWPALER GVLHVLDVPL AQPCRPGRLD MANAPAVLAT LDKAMHLLRA GAADALVTAP 
VHKGIINDAG IPFTGHTEYL AAACGSPKVV MLLAGRGLRV ALATTHLPLA QVAAAVTQEG 
LEGTLRILHR ALREDFALSE PRILVAGLNP HAGEGGHLGH EEQDVIAPVI AALQGESLRI 
SGPWPADTLF TPRLLEDADA VLAMYHDQGL PVLKYHAFGE AVNITLGLPI VRTSVDHGTA 
LDIAGTGRAE GGSLLRALDN AAEIVRNRRA AGC