Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | AFE_0129 |
Symbol | |
ID | 7135135 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Acidithiobacillus ferrooxidans ATCC 23270 |
Kingdom | Bacteria |
Replicon accession | NC_011761 |
Strand | - |
Start bp | 117611 |
End bp | 118351 |
Gene Length | 741 bp |
Protein Length | 246 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 643528543 |
Product | oxidoreductase, short-chain dehydrogenase/reductase family |
Protein accession | YP_002424639 |
Protein GI | 218667935 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.933318 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAAAGCTA CCGGAAAAGT CGTTCTCATC ACGGGCGCCG CCCGCAGGGT AGGCGCCGCC ATTGCCCGCC AGCTCGCCGC GGAAGGCTGC CAGCTCGCCC TGCATTATAA GCGATCCGCC GCAGACGCCG AAGCCCTGGC GCAGGAGTTG CGCGCGCGGC ATGGAACTGA ACCCTTGTTG ATCGCGGGCG ACCTGGCTGC CCCGGAAACG CCAGCGCACC TGATTGATGC CGCTATCGGG CATTTTGGTT GCCTGGACGG CCTCGTCAAC AACGCTTCGT TGTACTCCCC TGCGCCTTTC GGCGAAATCA CGCCGGAAGA CTGGGCGGCG ATGGAGGCCG TGCATCTGCG CGCGCCACTC TTTCTGACCC AGGTCGCCGC ACCGCATTTG CGAAAAACCG GCGGCGCCGT CGTCAACATC GGCGACATCC ACGCCGAAAT CCCCCTGCGC GGTTATCTGC CTTACAGTGT GACGAAGGCG GGTCTGCTGG CCCTCACCCG CGCCCTCGCC AAAGAGCTGG GGCCGGAGAT CCGCGTCAAC AGCGTCTCGC CCGGCGTGGT GCTCTGGGCC GAGGACAAGG ACCCGCCCGA CGGCGACCAG CAGGGACTCA TCGAACGCAA CGCCCTCAAG CGCGTCGGCA GCCCGGAGGA TATTGCCGGC GCCATCGCCT ATCTGCTTTT CGACGCGCCT TACGTCACCG GCCACAATCT CGTCGTCGAT GGCGGCCGCA TGTTATATTG A
|
Protein sequence | MKATGKVVLI TGAARRVGAA IARQLAAEGC QLALHYKRSA ADAEALAQEL RARHGTEPLL IAGDLAAPET PAHLIDAAIG HFGCLDGLVN NASLYSPAPF GEITPEDWAA MEAVHLRAPL FLTQVAAPHL RKTGGAVVNI GDIHAEIPLR GYLPYSVTKA GLLALTRALA KELGPEIRVN SVSPGVVLWA EDKDPPDGDQ QGLIERNALK RVGSPEDIAG AIAYLLFDAP YVTGHNLVVD GGRMLY
|
| |